Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., Pseudouridylate synthase from Xanthomonas campestris pv. campestris strain 8004

 Score = 76.3 bits (186), Expect = 6e-19
 Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 11/226 (4%)

Query: 14  TRKEATQLLKSGEVTVDDVVQKSGAFKLK--ETSCVEWQGREITLHGPRYIMMHKPDGVV 71
           +R EA + +  G V+V   V +   F L+  +   +   G+ +      Y+M++KP GVV
Sbjct: 48  SRTEAARWVADGRVSVAGRVVRDPEFPLRADQHDGIAIDGQPLAGPARLYLMLNKPRGVV 107

Query: 72  CSHEDGFNQ-TALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSHRVTSPKHKCEKT 130
            +  D   + T     D   +  L   GRLD  + GLLL ++D QW+  VT P    +KT
Sbjct: 108 TTVRDEQGRDTVYRCFDGAGLPWLAPVGRLDKASEGLLLFSNDPQWAAAVTDPATGPDKT 167

Query: 131 YRVWL---ADPIQADYAEQFNRGIELRGERELTLPAQLEVISETE----VLLTIHEGKYH 183
           Y V +    D +Q           +   +  L    Q+ V+ E E    + + + EG+  
Sbjct: 168 YHVQVDCRPDALQLARMHDGVADTDPESDGSLLRAKQVRVLREGERNAWLEIVLDEGRNR 227

Query: 184 QVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYLTEEEVASI 229
           Q++R+ AAL   V+ L R  IG + + E L  G +R L+  EV ++
Sbjct: 228 QIRRLLAALEIGVLRLVRVAIGPLAMGE-LGKGSWRLLSAAEVRAL 272