Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., ribosomal large subunit pseudouridine synthase E from Pseudomonas syringae pv. syringae B728a

 Score = 93.2 bits (230), Expect = 3e-24
 Identities = 65/179 (36%), Positives = 91/179 (50%), Gaps = 23/179 (12%)

Query: 59  PRYIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSH 118
           PR I+ +KP  V+    D   +   TL D + I  ++ AGRLD D+ GLLL+T+DGQ   
Sbjct: 31  PRLILFNKPFDVLTQFSD--EEGRATLKDFIKIPGIYPAGRLDRDSEGLLLLTNDGQLQA 88

Query: 119 RVTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETEVL---- 174
           R+  PKHK  KTY V +      +  +Q   G++L      TLPA+   + E ++     
Sbjct: 89  RIADPKHKLAKTYWVQVEGEPSDEQLQQLRDGVQLNDGP--TLPAEARQLDEPQLWPRNP 146

Query: 175 --------------LTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYR 219
                         L I EG+  QV+RM AA+G   + L R RIG  TL E L+ G+YR
Sbjct: 147 PVRFRKSVPTSWLELVIKEGRNRQVRRMTAAVGLPTLRLVRVRIGDWTL-EGLDQGQYR 204