Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., pseudouridine synthase from Synechocystis sp000284455 PCC 6803

 Score = 75.9 bits (185), Expect = 6e-19
 Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 38/202 (18%)

Query: 59  PRYIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSH 118
           P+ I+ +KP GV+C   D       TL D +N+ DL+  GRLD D+ GLLL+T +G+  H
Sbjct: 5   PQTIVFYKPYGVLCQFTDNSAHPRPTLKDYINLPDLYPVGRLDQDSEGLLLLTSNGKLQH 64

Query: 119 RVTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETE------ 172
           R+   +   ++TY   +      +  E   RGI        T PA  ++I+E +      
Sbjct: 65  RLAHREFAHQRTYFAQVEGSPTDEDLEPLRRGITFADYP--TRPAIAKIITEPDFPPRNP 122

Query: 173 ------------VLLTIHEGKYHQVKRMFAALGNKVIGLHRERIGQIT------------ 208
                       + +T+ EG+  QV+RM AA+G   + L R +I Q+T            
Sbjct: 123 PIRYRASIPTSWLSITLTEGRNRQVRRMTAAVGFPTLRLVRVQI-QVTGRSPQQGKGKSA 181

Query: 209 -----LDETLEPGEYRYLTEEE 225
                  E L PG++R LT  E
Sbjct: 182 ATWCLTLEGLSPGQWRPLTPWE 203