Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 199 a.a., Pseudouridine synthase, Rsu from Synechococcus elongatus PCC 7942

 Score = 79.3 bits (194), Expect = 5e-20
 Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 25/189 (13%)

Query: 60  RYIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSHR 119
           RY++ HKP  V+C           TL D +++ +++  GRLD D+ GLLL+T++G   HR
Sbjct: 4   RYLLFHKPYDVLCQFSPSDRPDQQTLKDYIDVPEVYPVGRLDRDSEGLLLLTNNGALQHR 63

Query: 120 VTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETEV------ 173
           +  P+   ++TY V +         +   +G++++  R  T PA+++ + + ++      
Sbjct: 64  LCHPRFGHDRTYWVQVEREPTEAALQALRQGVQIQDYR--TRPAKVQRLDDPQIPERDPP 121

Query: 174 ------------LLTIHEGKYHQVKRMFAALGNKVIGLHRERIG----QITLD-ETLEPG 216
                        LT+ EG+  QV+RM AA+G+  + L R  I     Q  L  + L PG
Sbjct: 122 IRFRKTVPTAWLALTLQEGRNRQVRRMTAAVGHPTLRLIRAAIATHPDQPPLQLQGLAPG 181

Query: 217 EYRYLTEEE 225
            +R LT  E
Sbjct: 182 TWRDLTAIE 190