Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 199 a.a., Pseudouridine synthase, Rsu (NCBI) from Rhodospirillum rubrum S1H

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 65/188 (34%), Positives = 92/188 (48%), Gaps = 23/188 (12%)

Query: 59  PRYIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSH 118
           PR I+++KP  V+    D     A TL   V I  ++  GRLD D+ GLLL+TD+G   H
Sbjct: 2   PRLILLNKPYDVLSQFTDRAEGRA-TLASLVPIPGVYVCGRLDRDSEGLLLLTDNGPLQH 60

Query: 119 RVTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRG--ERELTLPAQLEV--------- 167
            ++ P+ K  KTYR  +         ++  +G+ LR    R +T+ A  E          
Sbjct: 61  HISHPRSKVPKTYRAQVEGVADKAALDRLRQGVTLRDGPARAVTVEAIDEPAGLWPRDPP 120

Query: 168 ------ISETEVLLTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYL 221
                 I  + + LTI EG+   V+RM AA+G   + L R  IG  TL E L PG +R  
Sbjct: 121 IRWRANIPTSWIELTIDEGRNRMVRRMTAAVGLPTLRLIRWSIGDWTL-ENLPPGSWR-- 177

Query: 222 TEEEVASI 229
             EE AS+
Sbjct: 178 --EETASL 183