Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., pseudouridine synthase family protein from Dechlorosoma suillum PS

 Score = 78.6 bits (192), Expect = 9e-20
 Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 24/181 (13%)

Query: 60  RYIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSHR 119
           R ++ +KP GV+           L   D + +  ++ AGRLD D+ GLLL+TDDG    R
Sbjct: 3   RILLFNKPYGVLSQFTPEGRWQGLK--DYLEMPGVYPAGRLDADSEGLLLLTDDGVLQAR 60

Query: 120 VTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETEVL----- 174
           +  P++K EKTY V +         +   +G+ L+    +T PAQ  ++ E   L     
Sbjct: 61  IADPRYKLEKTYWVQVEGVPTEAALQALRQGVALKD--GVTRPAQARLMEEPHGLWLREP 118

Query: 175 --------------LTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRY 220
                         L I EGK  QV+RM A++G   + L R  IG+ ++ E L PGE+R 
Sbjct: 119 PIRYRAAIPTSWIELKIREGKNRQVRRMTASVGYPTLRLIRAAIGRASV-EGLAPGEWRL 177

Query: 221 L 221
           L
Sbjct: 178 L 178