Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., pseudouridine synthase family protein from Dechlorosoma suillum PS

 Score = 97.4 bits (241), Expect = 5e-25
 Identities = 72/246 (29%), Positives = 121/246 (49%), Gaps = 31/246 (12%)

Query: 2   RLDKFLCDALGTTRKEATQLLKSGEVTVDDVVQKSGAFKLKETSCVE-------WQGREI 54
           RL K + +    +R+EA + +++G V VD  V      ++  T+ +E        Q   +
Sbjct: 294 RLSKVMSEQGLCSRREADEWIEAGWVKVDGKVVSELGSRIVPTARIEVDPEARKHQAESV 353

Query: 55  TLHGPRYIMMHKPDGVVCSH-EDGFNQTALTLLDE--------------VNIQDLHFAGR 99
           T      I++HKP G V    EDG+    + +  E               +++ L  AGR
Sbjct: 354 T------IILHKPIGYVSGQAEDGYEPAVVLVQPENRWEEDKGGTRFKSAHLRRLAPAGR 407

Query: 100 LDVDTTGLLLITDDGQWSHRVTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGEREL 159
           LD+D+TG+L++T DG+ + R+       EK Y V +   +  +     N G+ L G +  
Sbjct: 408 LDIDSTGMLVLTQDGRVAKRLIGEDSTVEKEYLVRVEGELIENGLALLNHGLSLDGVK-- 465

Query: 160 TLPAQLEVISETEVLLTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYR 219
             PA +   +E ++   + EG+  Q++RM   +G KV+GL R RIG + L + L PG++R
Sbjct: 466 LKPAHVSWQNEEQLRFVLREGRKRQIRRMCELVGLKVVGLKRIRIGSVVLGK-LPPGQWR 524

Query: 220 YLTEEE 225
           YL  +E
Sbjct: 525 YLRSDE 530