Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., pseudouridine synthase family protein from Dechlorosoma suillum PS

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 19/243 (7%)

Query: 2   RLDKFLCDALGTTRKEATQLLKSGEVTVDDVVQKSGAFKLKETSCVEWQGREI-----TL 56
           RL K L  +   +R++  + + +G VTV+    + G     E   V+  GR +     +L
Sbjct: 126 RLHKILAQSGVGSRRDMEEWIAAGRVTVNGKPAEVGQLVGPEDK-VKVSGRLVHLRFGSL 184

Query: 57  HGPRYIMMHKPDGVVCSHEDGFNQTAL-TLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQ 115
             PR ++ HKP+G + S +D   + ++   L  +        GRLD +T+GLLL T+ G 
Sbjct: 185 RLPRVVLYHKPEGQIVSRDDPEGRDSVFDFLPRMRGSRWVAVGRLDYNTSGLLLFTNSGD 244

Query: 116 WSHRVTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETE--- 172
            ++R+  P++  E+ Y V +   +     +Q   GIEL        PA+   + +     
Sbjct: 245 LANRLMHPRYNLEREYAVRVLGDLDDATLKQLAAGIELEDG-----PARFTTLLDAGGEG 299

Query: 173 ----VLLTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYLTEEEVAS 228
                 +T+ EG+  +V+RMF A+G  V  L R R G   L   L+ G    LT+ +VA 
Sbjct: 300 ANHWYRVTLSEGRNREVRRMFEAVGATVSRLIRVRYGPFVLPARLKRGSTMELTDMDVAK 359

Query: 229 IWK 231
           + +
Sbjct: 360 LMR 362