Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., pseudouridine synthase family protein from Dechlorosoma suillum PS

 Score =  154 bits (389), Expect = 1e-42
 Identities = 92/237 (38%), Positives = 135/237 (56%), Gaps = 14/237 (5%)

Query: 1   MRLDKFLCDALGTTRKEATQLLKSGEVTVDDVVQKSGAFKLKETSCVEWQGREITLHGP- 59
           M+L+K L      TRKE   L+++G + +  VV +    +      V+ +G E T+    
Sbjct: 1   MQLEKLLHSQGFGTRKECRALVRNGWLEIGGVVVEDPFLE------VDPEGFEFTVDDQP 54

Query: 60  ------RYIMMHKPDGVVCSHEDGFNQTALTLLDEVNI-QDLHFAGRLDVDTTGLLLITD 112
                  Y+M+HKP    CSH+   +++  TLL E  + +D+   GRLD DTTGLLL+TD
Sbjct: 55  WRYREKAYLMIHKPGDYECSHKPKHHRSIFTLLPEELVNRDVQCVGRLDEDTTGLLLMTD 114

Query: 113 DGQWSHRVTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETE 172
           DGQ+ H+++SPK K  K Y +     I     +Q   G+ L GE E  +    E++S+T 
Sbjct: 115 DGQFIHQMSSPKRKVPKVYEITAKHSIDQAQIDQLLAGVLLHGEYEPVVADSCELVSDTV 174

Query: 173 VLLTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYLTEEEVASI 229
           + LTI +GKYHQVKRM  A+GN+V GL R RIG + L   L PGE+R+L  E++  +
Sbjct: 175 LRLTITQGKYHQVKRMLGAVGNRVEGLKRVRIGALDLPADLAPGEWRWLEAEDLEKL 231