Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., 23S rRNA pseudouridylate synthase B from Klebsiella michiganensis M5al

 Score = 79.3 bits (194), Expect = 7e-20
 Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 19/234 (8%)

Query: 2   RLDKFLCDALGTTRKEATQLLKSGEVTVDDVVQKSG-AFKLKETSCVEWQGREITLHGP- 59
           +L K L  A   +R+E    +++G V+VD  +   G   ++     +   G  I++    
Sbjct: 4   KLQKVLARAGHGSRREIEAKIEAGRVSVDGKIATLGDRVEIVPGLKIRIDGHLISVKESA 63

Query: 60  ----RYIMMHKPDGVVCSHEDGFNQ-TALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDG 114
               R +  +KP+G +C+  D   + T    L ++        GRLDV+T GLLL T DG
Sbjct: 64  EQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTDG 123

Query: 115 QWSHRVTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETE-- 172
           + ++R+  P  + E+ Y V +   I  D   Q +RG++L        PA  + I  T   
Sbjct: 124 ELANRLMHPSREVEREYAVRVFGQIDDDKLRQLSRGVQLEDG-----PAAFKTIKFTGGE 178

Query: 173 -----VLLTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYL 221
                  +T+ EG+  +V+R++ A+G +V  L R R G I L + L  G Y  L
Sbjct: 179 GINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDILLPKGLPRGGYTEL 232