Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., pseudouridine synthase from Burkholderia phytofirmans PsJN

 Score =  125 bits (315), Expect = 5e-34
 Identities = 71/184 (38%), Positives = 100/184 (54%), Gaps = 6/184 (3%)

Query: 47  VEWQGREITLHGPRYIMMHKPDGVVCSHEDGFNQTALTLLD-EVNIQDLHFAGRLDVDTT 105
           V+W  RE       Y++++KP G  CS +   + +  +LL  +   + +   GRLD DTT
Sbjct: 55  VDWPYREHA-----YLLLNKPAGYECSRDPQHHLSVFSLLPPQFAERGVQCVGRLDQDTT 109

Query: 106 GLLLITDDGQWSHRVTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQL 165
           GLLL++DDG++ H  TSPK K  K Y      P+          G+ L GE +       
Sbjct: 110 GLLLLSDDGKFVHLFTSPKRKVPKVYIATTRHPLDDAQLSALRDGVLLHGEPKPIAAVDA 169

Query: 166 EVISETEVLLTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYLTEEE 225
                  + LT+ EGKYHQVKRM AA GN+   LHRERIG + L ETL PG +++L E +
Sbjct: 170 AARGANTLALTVMEGKYHQVKRMIAAAGNRCEALHRERIGGLALPETLAPGAWQWLDETD 229

Query: 226 VASI 229
           + S+
Sbjct: 230 LGSL 233