Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., ribosomal large subunit pseudouridine synthase E (RefSeq) from Shewanella sp. ANA-3

 Score = 93.6 bits (231), Expect = 3e-24
 Identities = 66/180 (36%), Positives = 99/180 (55%), Gaps = 25/180 (13%)

Query: 59  PRYIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSH 118
           P  ++ +KP  V+C   D   Q   TL D + I  ++ AGRLD D+ GLLL+T+DGQ   
Sbjct: 88  PMIVLFNKPFDVLCQFTD--EQGRKTLKDYIPIPGVYAAGRLDRDSEGLLLLTNDGQLQA 145

Query: 119 RVTSPKHKCEKTYRVWL-ADPIQADYAEQFNRGIELRGERELTLPAQLEV---------- 167
           ++T PK K  KTY V +  +P  AD A +  +G+EL+    +TLPA++ +          
Sbjct: 146 KLTEPKKKTFKTYWVQVEGEPTDADLA-KLRQGVELKD--GITLPAKVSIMATPNVWPRN 202

Query: 168 --------ISETEVLLTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYR 219
                   I  T + + IHEG+  QV+RM A +G   + L R +IGQ +LD+ L  GE++
Sbjct: 203 PPIRERKNIPTTWLEIQIHEGRNRQVRRMTAHIGFPTLRLIRYKIGQWSLDD-LATGEHK 261