Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N2E2

 Score =  157 bits (397), Expect = 5e-43
 Identities = 111/370 (30%), Positives = 178/370 (48%), Gaps = 6/370 (1%)

Query: 35  MYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSFGRRPVMLCGIFLFGI 94
           M LPA+  I+   GV+      TL+ +  GF +G LL GPL+D  GRRP++L G+ +F I
Sbjct: 1   MGLPAIADISHALGVSLAFASQTLSVFIFGFVLGPLLFGPLSDRIGRRPILLAGLVVFTI 60

Query: 95  AAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDFARAMSFVTLVVTLAP 154
           A +       I  L   R  QG A  AAA +  A+VRD F+     +  S + LV  LAP
Sbjct: 61  AGIACTFAQDINLLLSARFLQGCAAGAAATLPIAIVRDQFEGVQARKLQSHLALVNNLAP 120

Query: 155 LVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPENRQPLRFRSTMRNYF 214
           L+AP++G  + +   WR I+  LA+   ++         ET + ++       S + +Y 
Sbjct: 121 LIAPLLGSAILVVGNWRWIYAALAVCGVILWLRAQTSFDETATRKSSNAA--ASLLTSYL 178

Query: 215 DLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFGYLFGLNIVAMIALTT 274
            + K+   +      AF+FAGMFA++ A   V+++  G++  GF  LF L  +  IA + 
Sbjct: 179 SVLKSRRFLVSTLIMAFNFAGMFAYIAASPLVFMNNLGMTSAGFAVLFALTAMGTIAGSW 238

Query: 275 INGRFVKK-IGSHNMLRFALFLQLMAGIGLFV-SWVLDWGLWGTVPFVVLFVGTISTIGS 332
           +NGR +      H +L  AL   L+  +GL V S +  + ++     VV+       +  
Sbjct: 239 VNGRLIHAGFAEHRVLGGALLASLLISLGLVVESQLAIYPIYILTALVVMSNLCTGIVMP 298

Query: 333 NSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAAL-PGTETWPMIFVMAACSVLSG 391
           N+    L      AG  ++L    +   G+    +  A   G  +  M  VM AC+VL G
Sbjct: 299 NATHSALEDLSITAGAGAALLRATQMLGGACASLLAGAFYDGQTSHAMAGVMLACAVL-G 357

Query: 392 AFYWTLGRKA 401
           A  + +G ++
Sbjct: 358 ALTFLIGHRS 367