Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N2E2

 Score =  125 bits (314), Expect = 2e-33
 Identities = 100/370 (27%), Positives = 170/370 (45%), Gaps = 18/370 (4%)

Query: 8   TQQTPQMSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAI 67
           T++   + LLL + L     L    ID+ LP+ P ++  F   +  + ++++ +  G A+
Sbjct: 10  TRKPATVGLLLTLTL-----LGVFPIDVVLPSFPALSEQFERPSSDIALSVSLFAVGIAL 64

Query: 68  GQLLHGPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQ 127
            QLL GPL+D  GR+ ++L GI +  + A     T+G  +  + R  Q   G    V+ Q
Sbjct: 65  SQLLVGPLSDVMGRKNLLLIGISVSAVGATGCVLTDGYWSFLFFRVVQAL-GCGCFVLSQ 123

Query: 128 AVVRDMFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAM 187
           A+++D+F   +  R   F+     +   V+P+ G  L  W GWR  F V A  A  V A 
Sbjct: 124 ALIQDLFTGGEQQRLRIFLVTCGGIFISVSPLAGTGLQSWMGWRGSFLVFAALAVGVFAG 183

Query: 188 VMWKIPETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVY 247
               +  T +   RQ L F ++ RN   +C +   M    + A +F+  F+F+     + 
Sbjct: 184 ASLLLKPTPAGRPRQRLDFIASYRN---VCGDFSFMTYWLTSALAFSCHFSFIVISPLLL 240

Query: 248 IDIYGVSPDGFGYL---FGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLF 304
           ID   +SP+ F +    +GL  +   A+ T+      +I     +   L L L AGI L 
Sbjct: 241 IDQLQLSPEAFSWALLGYGLAYIGGGAVATV---LSNRIAPQTQIITGLGLILAAGI-LM 296

Query: 305 VSWVLDWGLWGTVPFVVLFVGTISTIGSNSMG--LLLSKYPRMAGTASSLAGTLRFGTGS 362
           +      GL  T   + + V T  T  + +    L ++++P  AGT++S    L F  G 
Sbjct: 297 LGLSSQLGLSITTLLLPMIVCTAGTTIARAAAHTLAMNRFPEQAGTSASAGSVLIFIVGG 356

Query: 363 IIGAVVAALP 372
           +  A ++  P
Sbjct: 357 LTSAAISLTP 366