Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N2E2

 Score =  136 bits (343), Expect = 1e-36
 Identities = 94/360 (26%), Positives = 174/360 (48%), Gaps = 10/360 (2%)

Query: 21  VLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSFG 80
           +L  L A++ L+ ++ LPA   I +D GV A  + +TL+++   FA+GQL+ GPLAD +G
Sbjct: 28  LLAGLAAISMLSTNIILPAFAEIGKDLGVTARELGLTLSSFFITFALGQLVVGPLADRYG 87

Query: 81  RRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDFA 140
           R+ ++L G+ +F +  +++     ++ L   R  Q     AA+V+ +A+ RD+F+ E  A
Sbjct: 88  RQKLVLGGLSVFVVGTVIAGLATTLDVLIAGRVVQALGVCAASVLSRAIARDLFEGETLA 147

Query: 141 RAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPEN 200
           RA+S   +    AP  +P+ G  L++  GWR+IF ++ L A ++    +  + ET   + 
Sbjct: 148 RALSLTMIATAAAPGFSPLAGSVLSVTLGWRAIFILVGLAAVVLAFFYVRDLGETHPADR 207

Query: 201 RQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFGY 260
           R P   +S +  Y  L  +   +    S +   +G+FA   A   + +   G++    G 
Sbjct: 208 RAPHSAKSVVLAYGRLALDKRFILPALSMSLLMSGLFASFAAAPAILMQGIGLTSLQTGL 267

Query: 261 LFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQL---MAGIGLFVSWVLDWGLWGTV 317
            F   +  + A     G    ++   +  R A  + +   MAG GL +      GL    
Sbjct: 268 YFAATVFVVFAA----GMAAPRLAHRHGARIATLVGIACAMAGGGLLLVGPAAPGLGWYA 323

Query: 318 PFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSI---IGAVVAALPGT 374
             ++ F+  +         + +  + + AG AS+L G L  G  ++   + +V++  P T
Sbjct: 324 LSMITFLWGMGLANPLGTAITMGPFGKEAGMASALLGFLSMGAAALSTWLASVLSFAPVT 383