Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., MFS transporter from Pseudomonas fluorescens FW300-N2C3

 Score =  236 bits (603), Expect = 7e-67
 Identities = 143/379 (37%), Positives = 212/379 (55%), Gaps = 6/379 (1%)

Query: 14  MSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHG 73
           M+    ++LGAL A  PLAID YLPA P +A  FG +   +Q+TL AY  G +IGQL +G
Sbjct: 1   MNFRTILILGALSAFGPLAIDFYLPAFPAMATAFGTDEKHIQLTLAAYFLGLSIGQLAYG 60

Query: 74  PLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDM 133
           P+AD FGRR  +L G+ LF +A++  A    +E L   R  Q   G A  V+ +AVV D 
Sbjct: 61  PVADRFGRRIPLLTGVGLFTLASLACAYAPNLEWLIGARFVQALGGCAGMVISRAVVSDK 120

Query: 134 FDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIP 193
            D    A+  S + LV+ LAP++APM+GG L    GW+SIF  L +F+AL    V   +P
Sbjct: 121 CDAVGSAKVFSQLMLVMGLAPILAPMLGGLLVNLHGWQSIFIALTVFSALASTAVALWLP 180

Query: 194 ETLSPEN--RQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIY 251
           E+L P++  RQPL     +R Y  L  + V +G   +G  + AGMFA++    FV+I +Y
Sbjct: 181 ESL-PDHVPRQPL--SGALRQYGRLLTDSVYLGHALTGGIAIAGMFAYIAGSPFVFIKLY 237

Query: 252 GVSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLF-VSWVLD 310
           GV  + FG+LFG N    I +  +N R + K G   +L  A+++ L AG+ L  VS +  
Sbjct: 238 GVPAEHFGWLFGTNAAGFILVAQVNARLLSKRGPAFLLSRAVWVYLGAGLSLLAVSSLQP 297

Query: 311 WGLWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAA 370
             LW  +  + + + ++  I  N+    ++     AG+AS++ G L+F   +   A+VAA
Sbjct: 298 AQLWPLLVPLFICIASLGCILPNASACAMNGQGARAGSASAMLGCLQFSVAAGAAALVAA 357

Query: 371 LPGTETWPMIFVMAACSVL 389
           L      PM  V++ C +L
Sbjct: 358 LHNGTAVPMALVISLCGLL 376