Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., Drug resistance transporter Bcr/CflA subfamily from Pseudomonas syringae pv. syringae B728a

 Score =  238 bits (608), Expect = 2e-67
 Identities = 138/379 (36%), Positives = 215/379 (56%), Gaps = 4/379 (1%)

Query: 14  MSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHG 73
           M+L   ++LG+L A  PLAID YLP  P +A  FG +   VQ+TL AY  G ++GQL +G
Sbjct: 1   MNLRTILILGSLSAFGPLAIDFYLPGFPAMASYFGTDEKHVQLTLAAYFLGLSLGQLAYG 60

Query: 74  PLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDM 133
           P+AD FGRR  +L G+ LF +A++  A    +E L   R  Q   G A  V+ +A+V D 
Sbjct: 61  PVADRFGRRIPLLVGVTLFMLASVACAFAPSLEWLIAARFVQALGGCAGMVLSRAIVSDK 120

Query: 134 FDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIP 193
            +  + A+  S + LV+ LAP++APM+GG L   FGW+SIF  LALF+   +A V   +P
Sbjct: 121 CNAVESAKVFSQLMLVMGLAPILAPMLGGVLVSTFGWQSIFVSLALFSGACLAAVALGLP 180

Query: 194 ETL-SPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYG 252
           E++ +   RQPL     +  Y +L K+ V +G   +G  + AGMFA++    FV+I +YG
Sbjct: 181 ESMPATTPRQPL--SGALGQYLNLFKDGVFIGHALTGGIAMAGMFAYVAGSPFVFIKLYG 238

Query: 253 VSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLF-VSWVLDW 311
           V  + +G+LFG+N    I +  IN R ++K G   +L   +++ L AG+ L  +S +   
Sbjct: 239 VPAEHYGWLFGMNAAGFILVAQINARILRKTGPAFLLSRTVWIYLAAGLVLLAISGLRTE 298

Query: 312 GLWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAAL 371
            LW  +  + + V ++  I  N+    ++     AG+AS+L G L+F   ++  ++V  L
Sbjct: 299 ALWPLLVPLFICVASLGCIIPNASACAMNGQWARAGSASALLGCLQFSVAAVAASLVGVL 358

Query: 372 PGTETWPMIFVMAACSVLS 390
                 PM  V++ C VL+
Sbjct: 359 HDGTATPMALVISLCGVLT 377