Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  147 bits (371), Expect = 6e-40
 Identities = 108/389 (27%), Positives = 192/389 (49%), Gaps = 8/389 (2%)

Query: 11  TPQMSLLLYIVLGA-LGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQ 69
           T +MS     ++GA L AL P+++ +Y PAMP + R F  +  A+++TL+ Y  GFA  Q
Sbjct: 2   TLRMSERRTSIIGAFLVALGPISMALYTPAMPELVRAFASSEAAIKMTLSLYFGGFAFAQ 61

Query: 70  LLHGPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAV 129
           L+ G L+D  GRR   L  + ++   ++++A    I  L   R  QG   +    V +A+
Sbjct: 62  LVSGTLSDVIGRRRTTLIFMAIYLAGSLMAAFAPSIPVLLAGRLVQGIGASVGMTVARAI 121

Query: 130 VRDMFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVM 189
           VRD F     AR M+ + +++ L P V+P +G      FGW+SIF ++  FA +   +V 
Sbjct: 122 VRDQFTGTTAARIMNMIGMMLALGPAVSPTLGSIALGLFGWQSIFLLMVGFALMACFIVQ 181

Query: 190 WKIPETLSPENRQPLRFRSTMRNYFDLCKNP--VAMGLIFSGAFSFAGMFAFLTAGAFVY 247
             + ET +P+ R    FR  +  Y +L ++   V+  L+ +GA     ++A+ T   FV 
Sbjct: 182 LFMAETTTPD-RSKGHFRPILAAYGELMRDGRFVSSTLVIAGA--VGALYAWATMLPFVL 238

Query: 248 IDIYGVSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGL-FVS 306
           I   G++P  FG    +      + T      +++     ++   LF    A + L F  
Sbjct: 239 ISQVGLTPTEFGIGMLMQSGLFFSGTVTMRLMMRRFTPQALVPAGLFFIGAASLALAFTM 298

Query: 307 WVLDWGLWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGA 366
             L+      +  + ++   I+ +    M   ++ +P +AGTAS++ G ++   G ++G 
Sbjct: 299 HALEPTFLSVMTPIGIYAFGIAFVMPYMMTAAMAPFPHIAGTASAMMGFIQMSAG-LLGG 357

Query: 367 VVAALPGTETWPMIFVMAACSVLSGAFYW 395
            +AAL G     +  ++ +  +LS A Y+
Sbjct: 358 ALAALVGVPAMALGTIIPSFGLLSLASYF 386