Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  130 bits (328), Expect = 5e-35
 Identities = 104/375 (27%), Positives = 164/375 (43%), Gaps = 31/375 (8%)

Query: 20  IVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSF 79
           +++     L  LA+D+YLP +P +    G +   VQ+TL+ Y     +GQ++ GP++D  
Sbjct: 17  LLMAPFDILASLAMDIYLPIVPAMPGILGTSPAVVQLTLSLYMVMLGLGQIVFGPVSDRI 76

Query: 80  GRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMF-DRED 138
           GRRPV++ G  LF  A+   A ++        R  Q    +AA V   A +RD++ DR +
Sbjct: 77  GRRPVLIGGAMLFAAASFCLAASSSAIPFVAFRFLQAVGASAALVATFATIRDVYADRPE 136

Query: 139 FARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFA--ALVIAMVMWKIPETL 196
                S  + ++   P + P+ G  LA  FGWRSIF  L   A  AL+ A+  W      
Sbjct: 137 SVVIYSLFSSILAFVPALGPITGAMLAERFGWRSIFVTLGALAIIALLQALPRW------ 190

Query: 197 SPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPD 256
                +P     +   +  L ++          + +    F F +    V ID  G S  
Sbjct: 191 --HESRPSAAALSRHAFGPLLRSLAFWTYTLGFSAAMGTFFVFFSTSPRVLIDKAGYSEL 248

Query: 257 GFGYLFGLNIVAMIALTTINGRFVKKIG-SHNMLRFALFLQLMAGI-------GLFVSWV 308
            F   F    + MI       RFV + G S ++LR    L L A +       G+  SW 
Sbjct: 249 QFSLAFATVAIVMIITARFAERFVSRWGTSGSLLRGMCMLLLGAALLIAGETFGVPSSWT 308

Query: 309 LDWGLWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSL---AGTLRFGTGSIIG 365
               +W      V+ VG + T+   + G  L  +  MAG+A ++     +L  GT   + 
Sbjct: 309 FVMPMW------VMAVGIVFTVSVTANG-ALEDFGDMAGSAVAVYFCVQSLIVGTAGTL- 360

Query: 366 AVVAALPGTETWPMI 380
            +V  LPG   WP++
Sbjct: 361 -LVIGLPGDSAWPLV 374