Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  155 bits (393), Expect = 2e-42
 Identities = 107/369 (28%), Positives = 173/369 (46%), Gaps = 19/369 (5%)

Query: 21  VLGALGALTPLAIDMYLPAMPTIARDFGV-NAGAVQITLTAYTAGFAIGQLLHGPLADSF 79
           ++  L ++  ++ID+ LP +  I    GV +    Q  +TAY  G    QL  GPL+D F
Sbjct: 22  LMAMLMSINAISIDIMLPGLQEIGASLGVADENHRQYVITAYLLGMGFAQLFFGPLSDRF 81

Query: 80  GRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDF 139
           GRR  +L G+ L+G++A+         AL ++R  QG   AA  V+  ++VRD++     
Sbjct: 82  GRRAPLLGGLALYGVSALAIVFVPTFGALLFLRLVQGIGAAATRVITVSIVRDVYGGRQM 141

Query: 140 ARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPE 199
           A  MS V +V  + P++AP IG  + ++  W  IF V+ALFA  V   V  ++ ETL+P 
Sbjct: 142 AEIMSLVMMVFMIVPVIAPSIGQLIMLFSEWHMIFVVIALFAVAVALPVALRLRETLAPA 201

Query: 200 NRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVS---PD 256
           NR+P    S +  +  +  N +A+    + +     +F F+ +   + + +YG+    P 
Sbjct: 202 NRRPFTASSILAGFRIVLTNRLALFYTLATSALLGALFGFINSAQQILVGVYGLGVWFPA 261

Query: 257 GFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVLDWGLWGT 316
            F    G+  VA       N R V+  G   +   AL      G  L     +   L G 
Sbjct: 262 VFAAFAGMMAVASFT----NSRLVRTFGMRALSHAALL-----GFTLASFIWMSASLIGP 312

Query: 317 VP---FVVLFVGTI---STIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAA 370
           +P   F++L   T+     I +N   + +     +AGTASS+ G  +   G IIGA +  
Sbjct: 313 LPLPLFMLLHAATMFQFGLIAANFNAMAMEPLGHVAGTASSVLGFTQTIGGGIIGAFIGQ 372

Query: 371 LPGTETWPM 379
                  P+
Sbjct: 373 AFNNSVTPL 381