Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  160 bits (406), Expect = 5e-44
 Identities = 112/370 (30%), Positives = 180/370 (48%), Gaps = 22/370 (5%)

Query: 14  MSLLLYIV-LGALGALTPLAIDMYLPAMPTIARDFGV-NAGAVQITLTAYTAGFAIGQLL 71
           M L+ +IV +  + A   LAID  LPA+P+I +   V NA   Q+ +  +  GF + Q+ 
Sbjct: 1   MGLVEFIVTIAVMTASIALAIDSMLPALPSIGQTLDVANANDTQLVIGVFFLGFGLSQIF 60

Query: 72  HGPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVR 131
            G L+D+FGRR V+L G+ LF ++   ++    IE L  +R  QG  GAA  +   A+VR
Sbjct: 61  FGSLSDAFGRRSVLLGGLALFSLSMFAASWVESIETLLLLRFIQGIGGAAVRITTMAIVR 120

Query: 132 DMFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWK 191
           D F   D AR MS+V +V  + P+VAP +G  +  +  W  IF ++ +  A +    + +
Sbjct: 121 DCFGGRDMARVMSYVMIVFMIVPIVAPTLGQVVIAYADWHWIFILIGVVGAALFVWALTR 180

Query: 192 IPETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIY 251
           + E+L  E R PL   + +  +  +  N +  G +       A + A++ +   V+ ++Y
Sbjct: 181 MKESLPKEERLPLSVGAVLSGFRTVLTNRITCGYMIGMTLFTAVICAYVVSVQQVFGEVY 240

Query: 252 GVS---PDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFL-QLMAGIGLFVSW 307
            +S   P  F    G   VA  A    NG FV+  G   +   A+ L  L A IG  +S 
Sbjct: 241 NLSDWMPIAFAGTAGGIAVANFA----NGYFVRSFGMRRISHAAMILFTLFAAIGYVLS- 295

Query: 308 VLDWGLWGTVPFVV------LFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTG 361
                L GT  F +      L +   + I +N   + L     +AGTA+++ G +    G
Sbjct: 296 -----LAGTPAFAISYLLFSLLLMFFAVIATNFTAISLEPMGHLAGTATAVTGFVSTTGG 350

Query: 362 SIIGAVVAAL 371
           ++IG  V  L
Sbjct: 351 ALIGGAVGQL 360