Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., drug resistance transporter, Bcr/CflA family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  180 bits (456), Expect = 7e-50
 Identities = 116/378 (30%), Positives = 194/378 (51%), Gaps = 14/378 (3%)

Query: 21  VLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSFG 80
           +L +L  L+PLAID+YLP+MP +A DF V+   VQ TL  +     +GQ+L GPLAD +G
Sbjct: 8   ILMSLVLLSPLAIDIYLPSMPAMALDFSVDERQVQSTLVLFLFAMGVGQVLIGPLADRYG 67

Query: 81  RRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDFA 140
           RRPV L G  L+ I+++++      E L   R  QG A  + ++V  + VRD +   D A
Sbjct: 68  RRPVALFGTVLYVISSLLAMAALEFELLQLARLLQGLAACSTSIVAFSAVRDSYSSADSA 127

Query: 141 RAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPEN 200
           R  S++   + + P +AP +GG LAI FGWRS F  +A +  +++ +V +++PET  P +
Sbjct: 128 RIYSYLNGAICVIPALAPTLGGLLAIQFGWRSTFAFMAFYGLVMLLVVGYRLPET-RPAH 186

Query: 201 RQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFGY 260
            +          Y  + KN   M    +   + A +  +++  +   I   GVS   F  
Sbjct: 187 TESAGPLYRWGRYAPVLKNSHFMFYAVTCMAAMAAILCYVSYSSIWLIGKLGVSELAFSG 246

Query: 261 LFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVLDWGLWGT---- 316
           LFGLN V  +         ++K+G+   +  AL L ++A +   +  VL    W +    
Sbjct: 247 LFGLNAVVNVVACFAAPVVIRKLGNRPTVLVALGLMILASV---LELVLQLPAWASPMAA 303

Query: 317 -----VPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAAL 371
                +P ++L VG    +G  +  + L+ +   AGTA++L G ++    S+I A+V   
Sbjct: 304 SFAFMLPMMLLCVGFAFLLGP-ATSMALAPFGERAGTATALLGFIQMSGASVITALVQLT 362

Query: 372 PGTETWPMIFVMAACSVL 389
           P T  + + + M   +++
Sbjct: 363 PMTAPYAIGYTMGGLALV 380