Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., bicyclomycin resistance protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  223 bits (567), Expect = 1e-62
 Identities = 128/374 (34%), Positives = 216/374 (57%), Gaps = 7/374 (1%)

Query: 21  VLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSFG 80
           +L A+ A+TPLAIDMYLPAM  IA   G +   VQ +L+ Y AG+A G LL GP+AD +G
Sbjct: 22  LLAAIVAITPLAIDMYLPAMSVIALSLGSDVTHVQQSLSVYLAGYACGLLLFGPMADRYG 81

Query: 81  RRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDFA 140
           RRP++L G+  FGI +++ +  +  +A   +R  Q   G+AA VV+   V+ ++  ++ A
Sbjct: 82  RRPLVLFGLTGFGICSLLLSHVSTPDAFFGLRFVQAMIGSAATVVVPGYVKILYG-DNTA 140

Query: 141 RAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMW--KIPETLSP 198
           + MS+V+L++ LAPL+AP IG  +  +  W  IF+VL+ +A L + +V +  +IPE  + 
Sbjct: 141 KGMSYVSLIMMLAPLIAPSIGSFILGFSHWEMIFYVLSGYALLALTLVYFGLQIPEVKTE 200

Query: 199 ENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGF 258
           ++++P      +  Y  +       G I SG  +    F +LTA  FV++++YG+    F
Sbjct: 201 KHQRP----GFIEAYRTVLTRAGVKGFIASGVLTSFAFFCYLTASPFVFMEVYGLDSQHF 256

Query: 259 GYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVLDWGLWGTVP 318
             +F  N+ A++    +N R V + GS  +LR +    L+  + L  +  ++ GL+GT+ 
Sbjct: 257 AMVFASNVGALMLANILNSRIVGRFGSLRLLRASTLCGLVFALLLCAANTIELGLYGTLL 316

Query: 319 FVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAALPGTETWP 378
            +V  +  +  +  N+  ++L K+ R  GTA+++ GTLRFG G++ G ++AA       P
Sbjct: 317 TLVPLMACLGIMSVNADAIVLLKFQRETGTATAVIGTLRFGIGALAGPLLAAFYTGTALP 376

Query: 379 MIFVMAACSVLSGA 392
              +M    +L+GA
Sbjct: 377 FSALMLFAVLLAGA 390