Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., Drug resistance transporter Bcr/CflA subfamily (NCBI) from Rhodospirillum rubrum S1H

 Score =  152 bits (384), Expect = 2e-41
 Identities = 105/380 (27%), Positives = 179/380 (47%), Gaps = 19/380 (5%)

Query: 21  VLGALGALTPLAIDMYLPAMPTIARD-FGVNAGAVQITLTAYTAGFAIGQLLHGPLADSF 79
           ++  L ALT L+ID+ L A+  I+ D F  +A   Q+ +TAY  GFA+GQ + GPL+D  
Sbjct: 22  LMAMLMALTALSIDVMLVALADISSDYFLADANDRQLVITAYLLGFAVGQPVWGPLSDRI 81

Query: 80  GRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDF 139
           GR+PV++ G+ ++G+  + +  +   E L   R  QG  GA+  V+  AVVRD +     
Sbjct: 82  GRKPVLIAGLVIYGLGCLGAMVSPSFETLLAARLVQGLGGASPRVMTMAVVRDRYAGSGM 141

Query: 140 ARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPE 199
           AR MS + ++  + P++AP +G  +  +  W  +F  + +F  +V+   + ++ ET  P+
Sbjct: 142 ARVMSLLMMIFIIVPILAPTMGSAVMAFAPWHWLFGFMMVFDLIVLVWTLTRLRETHRPQ 201

Query: 200 NRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFG 259
            +        +     +  N   +G   +  F    +  ++     V++++Y    + F 
Sbjct: 202 RQLAPSLGGLLETLRVVVSNRQTVGYTVAFGFMMGSLMGYVGTAQQVFVEVYH-EVELFP 260

Query: 260 YLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVLDWGLWG--TV 317
            LFG    A+ A + IN RFV +IGS  M   AL       +G FV+  L    +G    
Sbjct: 261 ILFGAIASAIAAASIINARFVTRIGSRRMSHAAL-------LG-FVAVGLVTAAFGFPAK 312

Query: 318 PFVVLFVGTI-------STIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAA 370
           P + LF+  +         IG N   + +    R+AG ASS  G       + +G  V  
Sbjct: 313 PPLALFMAALGIQFFCFGLIGPNFNAMAMEPMGRVAGAASSFVGFYSTAASAFLGWAVGQ 372

Query: 371 LPGTETWPMIFVMAACSVLS 390
                  P++   A   +L+
Sbjct: 373 QFDDSVRPLMMGFAGFGILA 392