Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., multidrug effflux MFS transporter from Rahnella sp. WP5

 Score =  212 bits (539), Expect = 2e-59
 Identities = 130/384 (33%), Positives = 199/384 (51%), Gaps = 7/384 (1%)

Query: 20  IVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSF 79
           +VLG+L AL PL  D+YLPA+P +A D   +  + Q++LTA   G   GQLL GPL+D +
Sbjct: 14  LVLGSLAALGPLCTDLYLPALPEMAGDLNTSTASAQLSLTAGLLGLGFGQLLFGPLSDRY 73

Query: 80  GRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDF 139
           GR   +L  + L   A++  A    I  L   R  QG AGA  AV+ +AV RD+++  + 
Sbjct: 74  GRMRPLLWSLALLLAASVWCAVAQDISQLIVARLLQGIAGAGGAVLSRAVARDLYNGHEL 133

Query: 140 ARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPE 199
            R  + + LV  LAP++AP++GG +  W  WR IF VLA  A L+ +    K+ ETL+PE
Sbjct: 134 TRFFALLMLVNGLAPIIAPVLGGAMLHWVNWRGIFGVLAFIAILLFSFSSLKLHETLTPE 193

Query: 200 NRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFG 259
            R      S + + F L K+   MGL  +  F  AGMFA++ A  FV   IY +SP  F 
Sbjct: 194 RRSGGGIFSMLGSVFSLLKHRPFMGLCLTQGFIMAGMFAYIGASPFVLQQIYHLSPQMFS 253

Query: 260 YLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVLDWGLWGTVPF 319
             F +N + ++    ++ R  ++ G   +++  L +  +A + L +S  L+  L   +  
Sbjct: 254 LCFAINGIGLVISAQVSTRLSRRFGEMALVKAGLCIAAVASVALVISASLNAPLVMLLVP 313

Query: 320 VVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAALPGTETWP- 378
           +   V  I  I  N+  L +    + AG+AS+L G   F     +GAV   + G  + P 
Sbjct: 314 LFFSVMVIGIISPNAGSLAMQSQGKNAGSASALLGVCMFA----LGAVAVPVTGFGSHPA 369

Query: 379 --MIFVMAACSVLSGAFYWTLGRK 400
             M   +  C  ++   + TL RK
Sbjct: 370 LSMGLTILGCYAIAILMFVTLVRK 393