Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., multidrug effflux MFS transporter from Rahnella sp. WP5

 Score =  137 bits (346), Expect = 4e-37
 Identities = 97/361 (26%), Positives = 180/361 (49%), Gaps = 10/361 (2%)

Query: 12  PQMSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLL 71
           P++S ++ + +  L A   +A D+YLPAMP +AR+F V+   +  T++AY    AI QL 
Sbjct: 30  PRLSFIITVAM--LSAFGLIASDIYLPAMPDMAREFAVDPSQISQTISAYLLALAICQLF 87

Query: 72  HGPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVR 131
           +GPLAD FGR+PV+L GI ++   ++  A      +    R  QG   AA  V+ + ++ 
Sbjct: 88  YGPLADRFGRKPVLLAGIAIYIGGSLGCAVAESYSSFLLFRLLQGAGAAAGLVIGRTLIA 147

Query: 132 DMFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWK 191
           D  ++   AR  S +  +V+L+P +APMIGGHLA  FGW + F  +A+F    + M+++ 
Sbjct: 148 DTCNKAISARVYSVIYPLVSLSPAIAPMIGGHLAATFGWHTDFIFVAIFGMATMLMIIF- 206

Query: 192 IPETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIY 251
           + ET  PEN       S    +  +C +             ++  F +LT   F++  + 
Sbjct: 207 MRET-RPENISAP--ASPFSGFRVICSDTGFRRYTLIVCCIYSAWFIYLTQSPFLFAQL- 262

Query: 252 GVSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIG-LFVSWVLD 310
           G+S +  G+L+      +I+   +  R +       ++   +   ++ G+    V +  +
Sbjct: 263 GMSEETRGWLYIPLTAGIISANVLTKRLLNFWQYDRIVTAGIMCFVLGGLAYAAVVFTAE 322

Query: 311 WGLWG-TVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVA 369
            G+    +P  ++ +   S++     G + S +   A TAS + G ++ G+ ++    ++
Sbjct: 323 KGILSILLPMCLVSLANGSSLSLAISGAISSGHGH-AATASGMIGFMQIGSAAVFANFMS 381

Query: 370 A 370
           A
Sbjct: 382 A 382