Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella loihica PV-4

 Score =  177 bits (450), Expect = 4e-49
 Identities = 114/375 (30%), Positives = 195/375 (52%), Gaps = 8/375 (2%)

Query: 21  VLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSFG 80
           +L  +  L+PLAID+YLP+MP +A +F V+A  VQ TL  +     +GQ+L GPLAD +G
Sbjct: 8   ILMLMVVLSPLAIDIYLPSMPVMAAEFAVSASQVQSTLVLFLFAMGVGQVLIGPLADRYG 67

Query: 81  RRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDFA 140
           RRP+ L G+ L+  +++++A     + L   R  QG A  + ++V+ + VRD F  ++ A
Sbjct: 68  RRPIALGGLLLYIASSLLAAVAMEFQWLQLARVLQGLAACSTSIVVFSAVRDCFTPKEGA 127

Query: 141 RAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPEN 200
           R  S++  V+ + P +AP +GG LA+ FGWRS F  + L+A +++ +V +++PET  P N
Sbjct: 128 RYYSYLNGVICVIPALAPTLGGLLALQFGWRSTFVFMTLYAIIIMIIVGYRLPET-RPAN 186

Query: 201 RQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFGY 260
                       Y  +  +P  M   F+     A + A+++      I+  GVS   F  
Sbjct: 187 TVTEGPLYRWSRYKPVLMDPHFMFYAFACMAGMAAILAYVSYSPVWLIETIGVSELTFSG 246

Query: 261 LFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAG-IGLFVSWV-----LDWGLW 314
           LFGLN +  I         ++K+G+   +  AL   L++  + L V W      L     
Sbjct: 247 LFGLNALVNIGACFAAPVVIQKLGNRPTVIVALSAMLVSALLQLAVQWAGPQTGLAAAFG 306

Query: 315 GTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAALPGT 374
             +P ++L +G    +G  +  + L+ +   AGTA+++ G ++    SI+  +V     T
Sbjct: 307 FMLPMMLLCIGFALLLGP-ATSMALAGFGERAGTATAMLGFIQMSGASILAGLVQQTSLT 365

Query: 375 ETWPMIFVMAACSVL 389
             + ++ VM   + L
Sbjct: 366 APYAVVVVMGGLASL 380