Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella loihica PV-4

 Score =  232 bits (591), Expect = 2e-65
 Identities = 137/392 (34%), Positives = 217/392 (55%), Gaps = 7/392 (1%)

Query: 2   SASTVNTQQTPQMSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAY 61
           S+     Q  P ++LL+ + L A+ A+TPLAIDMYLPAM T+A  F  +   VQ +L+ Y
Sbjct: 8   SSELSQPQGIPNLALLIPM-LSAIVAITPLAIDMYLPAMSTLASSFNSSVTTVQQSLSLY 66

Query: 62  TAGFAIGQLLHGPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAA 121
            AG+A+G L  GP+AD  GRRP++L G+  FG+ ++  A    +E    +R  Q F GAA
Sbjct: 67  LAGYALGMLTFGPIADRIGRRPLVLLGLTGFGLISLALAFVTSVEVFLGLRFLQAFIGAA 126

Query: 122 AAVVIQAVVRDMFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFA 181
           A VV+   +++++ + + A+ MS+V+L++ LAPL+AP +G  +     W  IF++LA +A
Sbjct: 127 ATVVVPGYIKEVYGK-NTAKGMSYVSLIMMLAPLIAPTMGSLILELGEWHLIFFILACYA 185

Query: 182 ALVIAMVMWKI--PETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAF 239
           +L++ +V+ K+  P       R     RS    Y  +   P     I SG  +    F +
Sbjct: 186 SLLLVLVLTKLRMPSDAQTSGRSQ---RSFFGAYAVVFTKPGVKLHIASGVMTSFAFFCY 242

Query: 240 LTAGAFVYIDIYGVSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMA 299
           LTA  FVY++++G+    F  LF  N+ A++    IN R V K GS  ML+ A  L  +A
Sbjct: 243 LTASPFVYMEVFGLDKSLFAILFSTNVGALMLANVINSRIVVKYGSRRMLKVATLLAAVA 302

Query: 300 GIGLFVSWVLDWGLWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFG 359
           GIGL    +       TV  ++ F+G +  +  N+  ++L K+ +  GTA+++ GTLRFG
Sbjct: 303 GIGLLSVNLFGLSYHFTVAALIPFMGFLGVMSVNADAIVLMKFQQETGTATAVIGTLRFG 362

Query: 360 TGSIIGAVVAALPGTETWPMIFVMAACSVLSG 391
            G++ G ++A        P   +M    +L G
Sbjct: 363 FGALAGPLLALFYTGTAVPFSALMLGAVLLVG 394