Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., drug resistance transporter, Bcr/CflA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  177 bits (449), Expect = 5e-49
 Identities = 112/374 (29%), Positives = 194/374 (51%), Gaps = 8/374 (2%)

Query: 21  VLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSFG 80
           +L +L  L+PLAID+YLP+MPT+A +F V+A  VQ TL  +     +GQ+L GPLAD +G
Sbjct: 8   ILMSLVLLSPLAIDIYLPSMPTMAAEFAVSASEVQSTLVLFLFAMGVGQILIGPLADRYG 67

Query: 81  RRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDFA 140
           RRPV L G+ L+G +++++A       L   R  QG A  + ++V+ + VRD +  ++ A
Sbjct: 68  RRPVALFGVLLYGASSLLAAAAIEFHWLQIARVLQGLAACSTSIVVFSAVRDCYSPKEGA 127

Query: 141 RAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPEN 200
           +  S++   + + P +AP +GG LA+ FGWRS F  + L+A L++ +V +++PET  P N
Sbjct: 128 KIYSYLNGAICVIPALAPTLGGLLAMQFGWRSTFVFMTLYAILMMLLVGYRLPET-RPAN 186

Query: 201 RQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFGY 260
                       Y  +  N   +   F+   + A + ++++      I   GVS   F  
Sbjct: 187 TVSTGPLYRWSRYKPVLSNTHFLFYAFACMSAMAAILSYVSYSPVWLIGHLGVSELAFSG 246

Query: 261 LFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVL--DWGLWGT-- 316
           LFGLN +  I         ++K+G+      AL L +++ + +  +       G+     
Sbjct: 247 LFGLNALVNIVACFAAPVVIRKLGNRPTAILALALLVLSAVFIIAAQAFGPSAGMAAAFA 306

Query: 317 --VPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAALPGT 374
             +P ++L +G    +G  +  + LS +   AGTA+++ G ++    S+I  +V     T
Sbjct: 307 FMLPMMLLCIGFAFLLGP-ATSMALSAFGERAGTATAMLGFIQMSGASVIAGLVQQTNLT 365

Query: 375 ETWPMIFVMAACSV 388
             + +  VM   S+
Sbjct: 366 APYAVALVMGFFSI 379