Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., drug resistance transporter, Bcr/CflA subfamily (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  159 bits (403), Expect = 1e-43
 Identities = 117/395 (29%), Positives = 200/395 (50%), Gaps = 23/395 (5%)

Query: 3   ASTVNTQQTPQMSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYT 62
           AS    + TP     L ++ G    +  L+++++LP++P +A  F      +Q++++ Y 
Sbjct: 6   ASRFLDRNTPPHLATLVLMAG----VAALSMNVFLPSLPGMAVYFDAEYAVMQLSVSLYL 61

Query: 63  AGFAIGQLLHGPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAA 122
              A+ QLL GPL+D +GRRPVML    LF +A + +     +E     R AQ    A+A
Sbjct: 62  MMTAVLQLLVGPLSDRYGRRPVMLISTALFALATLGAIFAPTVEVFLACRMAQAVI-ASA 120

Query: 123 AVVIQAVVRDMFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAA 182
            V+ +A+VRDM  + + A  + +VT+ + + P++ P +GG L   FGWR+ FW+L   A 
Sbjct: 121 LVLSRAIVRDMVGQAEAASLIGYVTMGMAIVPMIGPALGGLLDETFGWRASFWLLFAAAV 180

Query: 183 LVIAMVMWKIPETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTA 242
            ++ ++   + ET    NR    FR+ +  Y +L K     G + + AF+    FAFL  
Sbjct: 181 AMLWLIWSDLGET--APNRSG-GFRAQVAEYPELLKARRFWGYVAAAAFASGVFFAFLGG 237

Query: 243 GAFVYIDIYGVSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIG 302
             ++  +++G+SP   G  FG   +  +    ++GRF  +IG + M+   L+  L+  +G
Sbjct: 238 APYLGSEVFGLSPAILGIYFGAPALGYVLGNFLSGRFSIRIGINRMI---LWGSLITSVG 294

Query: 303 LFVSWVLDWGLWGTVPFVVLFVGTISTIG-------SNSMGLLLSKYPRMAGTASSLAGT 355
           +  S +L +    T P  + F    +T+G        N+    LS  P +AGTAS L G 
Sbjct: 295 MAAS-ILIYAAGLTHP--LSFFALTATVGIGNGMIIPNATAGSLSVRPHLAGTASGLGGA 351

Query: 356 LRFGTGSIIGAVVAAL--PGTETWPMIFVMAACSV 388
           +  G G+ +  +   L   GT  +P+  +M   S+
Sbjct: 352 IMVGGGAAMSVLAGILLPLGTGPYPLQALMLLTSL 386