Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  147 bits (370), Expect = 7e-40
 Identities = 112/382 (29%), Positives = 184/382 (48%), Gaps = 16/382 (4%)

Query: 15  SLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGP 74
           SLLL I    L +L    +D+YLPA+  I + F V+ G +Q+TLT Y A   +GQLL GP
Sbjct: 20  SLLLLIPFDLLASL---GMDLYLPAINDIRQSFSVSQGQMQLTLTLYMAILGLGQLLFGP 76

Query: 75  LADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMF 134
           L+D+ GRR V++ G  ++  +++  A T+       +R  Q  + +A  V   A VRD+F
Sbjct: 77  LSDAIGRRRVVIAGALVYAGSSLAMALTDSFSVFLLLRIVQALSASAVLVAAFATVRDVF 136

Query: 135 -DREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIP 193
            DRE+     + +  V+   P+VAP IG  +   + WR IF+ LA+FAALV    + K P
Sbjct: 137 ADREEGVVIYAIMGSVLAAVPVVAPFIGSLIDGLWHWRGIFYTLAIFAALVGLHALLKWP 196

Query: 194 ETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGV 253
           ET  P    P  +       F++ +    +G   + A +    F + +A   + +D  G+
Sbjct: 197 ET-RPAQTHPFEW----SRCFNIIRAKAFLGYTLAYATAMGAFFVYFSASPSILMDKLGL 251

Query: 254 SPDGFGYLFGLNIVAMIALTTINGRFVKKIGSH-NMLRFALFLQLMAGIGLFVSWVLDWG 312
               F   FG   + MI  T      VK+ G+   +LR  + + L +G+   + W+    
Sbjct: 252 DKVTFSLWFGSVAIVMIITTRFVKHLVKRWGTQGTVLRGLIGMMLSSGLLYGLEWLNGLS 311

Query: 313 LWG-TVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLR-FGTGSIIGAVVAA 370
           L G  +P   + V    T    + G  L+ +   AG A++L   +      +++  ++  
Sbjct: 312 LLGFMLPMYFIGVHIALTCAVTANG-ALAAFSHSAGLATALYYAIESLFLSALVSLLIWL 370

Query: 371 LPGTETWPM---IFVMAACSVL 389
           LP   T  +   I + A+ S+L
Sbjct: 371 LPSGTTLVICSYILISASLSLL 392