Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., putative efflux protein, MATE family from Pseudomonas stutzeri RCH2

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 91/410 (22%), Positives = 170/410 (41%), Gaps = 19/410 (4%)

Query: 17  RRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTGG 76
           R L A+ALP+ +  +  ++ G VD +M G++   ++AAV +         ++L G+T   
Sbjct: 15  RTLFALALPMMIAQLASTAMGFVDTVMAGRVSPHDLAAVALGNSIWVPVYLLLSGITLAT 74

Query: 77  ALLTAQYWGAGDRKGVREST-ALTWLVSNFFAFFTVLLFLFFPQQIMSLTTDSEQVNALG 135
               AQ +GAG    +        W+ +      T  L ++  + ++ L      +    
Sbjct: 75  TPNVAQRYGAGAHGEIGPLVRQALWMGAGI--GLTSALLMWNAEPVLHLMRVEPALIEPT 132

Query: 136 SQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILIFGKFGFPA 195
             YL   +    AVA    +      +  P  S     +G++ N+ LN++ I+GKFG PA
Sbjct: 133 MAYLRAVACGFPAVALYQVLRCFSDGLGHPRPSMVIGILGLLLNIPLNYVFIYGKFGIPA 192

Query: 196 MGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPK--ISRFLRLSLPT 253
           MG  G  ++T L   + +  L +     K   A+    + +  +WP+  + R L LS+  
Sbjct: 193 MGGVGCGVSTAL---VMLFMLIAMSVWVKRAPAYQRSQLFSHFEWPRWPMLRHL-LSVGV 248

Query: 254 TFNFLIWA-AGLFTYHAIM-GQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGNQL 311
                ++A A +F+  A++ G  G   +A   +     S+   + + +  A  V +G +L
Sbjct: 249 PIGIAVFAEASIFSVIALLIGALGATVVAGHQIALNFTSLIFMIPLSLGMAVTVRIGQEL 308

Query: 312 G-AKNYEAVYYQAIGVTACSVLVGIVVAIG-LYLVQIPVLGAFTALTPETRELSEKFMLI 369
           G +   +A +   +G+ A  V      ++  L+  QI  +      TP+   ++    L 
Sbjct: 309 GRSAPRDARFVAGVGIAAALVYACFSASVMLLFSEQIARI-----YTPDPAVIAVAASLF 363

Query: 370 LCLGIV-LRSFPMTAIVGVLRAGGDVKFCLGQDIVAQWCIGIPLAAFAAL 418
               +            G LR   D +  +   + A W IG+P+     L
Sbjct: 364 FYAALFQFSDVVQVTAAGALRGYQDTRMTMIYTLFAYWGIGLPVGYLLGL 413