Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., MATE family efflux transporter from Synechocystis sp000284455 PCC 6803

 Score =  106 bits (265), Expect = 1e-27
 Identities = 96/399 (24%), Positives = 173/399 (43%), Gaps = 8/399 (2%)

Query: 17  RRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTGG 76
           R  + +A+P+    +  ++ G VD +M+G LG+  +AA G+A        +  VG+ +G 
Sbjct: 15  REFLKLAVPLAGAQMAQAATGFVDTVMMGWLGQDVLAAGGLATMIFMAFMMTGVGLISGV 74

Query: 77  ALLTAQYWGAGDRKGVRESTAL-TWLVSNFFAFFTVLLFLFFPQQIMSLTTDSEQVNALG 135
           + L A+ +GAG  + + + T    W+V         +LF+     +M  +  ++    L 
Sbjct: 75  SPLVAEAYGAGQTRRIGQLTRQGLWIV--LLLSIPGMLFITHLNGVMHWSGQADTTIILS 132

Query: 136 SQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILIFGKFGFPA 195
             YL + ++ +F     +++   + A+ +            + N++ N+ L FGK+GFPA
Sbjct: 133 DSYLNVMAWGLFPAIAFATLRGCIIALSQARPIMLIVIAATLFNILGNYGLGFGKWGFPA 192

Query: 196 MGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISRFLRLSLPTTF 255
           +GI G AIA++ +  I    L  Y+   K L  +   D    +    + + L +  P   
Sbjct: 193 LGITGLAIASISAHWIMFLSLLVYMLWHKPLHQYSLFDSLHHLKPRILQQLLWVGGPIGI 252

Query: 256 NFLIWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGNQLGAKN 315
             ++      T    MG  G   LAA  V++    +   + + MS AA V VG   G ++
Sbjct: 253 AAVLEYGLYLTASFFMGALGTPILAAHQVVSQTVLVLFMVPLAMSYAATVRVGQWFGQQH 312

Query: 316 YEAVYYQAIGVTACSVLVGIVVAIGLYLVQIPVLGAFTALTP----ETRELSEKFMLILC 371
           +  +   A+     +VL  +   I L      ++G +  L      E   +    M I  
Sbjct: 313 WPQIRQAALVSIGLAVLFMLTAGIALLAYPQQIIGLYLDLNDPANGEALNVGISIMKIAA 372

Query: 372 LGIVLRSFPMTAIVGVLRAGGDVKFCLGQDIVAQWCIGI 410
            G+VL     TA  GVL+   D +  +    +A W IG+
Sbjct: 373 FGLVLDGLQRTA-NGVLQGLQDTRIPMVLGTIAYWGIGL 410