Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., transmembrane protein from Sinorhizobium meliloti 1021

 Score = 71.6 bits (174), Expect = 5e-17
 Identities = 100/367 (27%), Positives = 157/367 (42%), Gaps = 38/367 (10%)

Query: 17  RRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARAT-----FVTTIMLVG 71
           R + +IALP+TL  +     GLVD  ++G+LG+AE+ A G+A  A      F T   L  
Sbjct: 24  RLIFSIALPMTLGFLTTPLLGLVDTAVVGRLGQAELLA-GLAVGAVMFDLIFTTFNFLRA 82

Query: 72  VTTGGALLTAQYWGAGDRKGVRESTALTW------LVSNFFAFFTVLLFLFFPQQIMSLT 125
            TTG   L AQ +G GDR   RE  A+ W      LV+         + L     +M   
Sbjct: 83  ATTG---LVAQAYGRGDR---REQQAVFWRSLMIALVTGAAIVLISPILLSAGLWLMGPG 136

Query: 126 TDSEQVNALGSQYLIITSFTMFAVACVSSMAVGLRAMHKPG--VSTFFSGIGIVSNVVLN 183
            +  +V      Y I++     A   +    +G R     G  + T  +G  IV +++L 
Sbjct: 137 PEVAEVTRTYFLYRILSGPAALANYAILGFVLG-RGEGTLGLMLQTLINGTNIVLSILLG 195

Query: 184 WILIFGKFGFPAMGIQGAAIATVLSGAIEIACLYSYLYGK-KHLMAFGWQDIKAVIDWPK 242
             L          G+ G AI TV    I     ++ +YG+     A GW  I A     K
Sbjct: 196 LFL--------GWGVAGVAIGTVAGEVIGALAGFAIVYGRFDSKDAPGWAMIFARDRLKK 247

Query: 243 ISRFLRLSLPTTFNFLIWAAGLFTYHAIMGQT-GVQGLAALSVMTPVESISLSLLIGMST 301
           +    R  +  +F  L      FT    +G + G   LAA +V+  +  ++   L G++T
Sbjct: 248 LFGLNRDIMIRSFALL----AAFTLVTRIGTSFGPVTLAANAVLMTIFLVAGYYLDGLAT 303

Query: 302 AAAVLVGNQLGAKNYEAVYYQAIGVTAC-SVLVGIVVAIGLYLVQIPVLGAFTALTPETR 360
           AA  L G  +GA  Y   + + + +TA  S+ +  +  + L      V+   T   P+ R
Sbjct: 304 AAEQLTGRSIGA-GYRPAFDRVLRMTALWSLGLAALTTLALLAFGNAVVNMLTT-APDVR 361

Query: 361 ELSEKFM 367
            L+ ++M
Sbjct: 362 ALAYQYM 368