Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  116 bits (291), Expect = 1e-30
 Identities = 108/410 (26%), Positives = 172/410 (41%), Gaps = 15/410 (3%)

Query: 16  FRRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTG 75
           FR  + + +P     +   +    DVLM+GQLG  ++AA+ +A +  F   I   G    
Sbjct: 21  FRASLYLGVPFIGAQLAQLAINTTDVLMVGQLGATQLAAIILATQVFFTIFIFGSGFANA 80

Query: 76  GALLTAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTDSEQVNALG 135
              + AQ  G GD+  VR S  +   V   +   T  + L+  + I+       +V AL 
Sbjct: 81  VVPMVAQAQGRGDQVSVRRSVRMGMWVVLLYGVLTAPV-LWMAEPILLFAGQKPEVAALA 139

Query: 136 SQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILIFGKFGFPA 195
            +YL I  + +F       +   L  + + GV  + + + +V N  L ++LIFG FGFP 
Sbjct: 140 GEYLHIAQWAIFPSLIFMVLRAFLSGLERAGVILYVTLVTLVLNAALCYVLIFGHFGFPE 199

Query: 196 MGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFG-----WQDIKAVIDWPKISRFLRLS 250
           +GI GAA+A +    +  A    Y+  +  L  F      W+      DWP     + L 
Sbjct: 200 LGIFGAAVAALGVALLGAALTIGYIRRQPELHRFELFVRFWRP-----DWPAFGEVVHLG 254

Query: 251 LPTTFNFLIWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGNQ 310
           +P +   L   +       +MG  G   LAA  +     SI+  + +G++ A  V +G  
Sbjct: 255 IPISVTILAEVSLFTVASLLMGTIGTIELAAHGIALQFASIAFMIPLGLAQAGTVRIGLA 314

Query: 311 LGAKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQIPVLGAF-TALTPETRE-LSEKFML 368
            G+ +   V   AI V    V    V +    L    + G +     P+  E L+    L
Sbjct: 315 YGSGDMVGVKRAAIAVLTLGVGFAAVGSTIFALFPHELAGLYLDTRRPDAAEVLAFAGPL 374

Query: 369 ILCLGIVLRSFPMTAI-VGVLRAGGDVKFCLGQDIVAQWCIGIPLA-AFA 416
           I+  G       + AI  G+LR   D    +   ++A W IG   A AFA
Sbjct: 375 IVIAGAFQLVDGLQAIAAGMLRGLKDTTIPMILAMIAYWPIGFFCAWAFA 424