Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Multi antimicrobial extrusion protein MatE (NCBI) from Rhodospirillum rubrum S1H

 Score =  106 bits (264), Expect = 2e-27
 Identities = 97/417 (23%), Positives = 180/417 (43%), Gaps = 10/417 (2%)

Query: 20  IAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTGGALL 79
           +++A P+ L N+  ++    D+L++G LG   +AA  +AA       +  +G+ +    L
Sbjct: 24  LSLAWPLILTNLAQAALTTTDLLLIGSLGSRSLAAAAMAAGLFQALMLFGLGLVSATLPL 83

Query: 80  TAQYWGAGDRKGVRE--STALTWLVSNFFAFFTVLLFLFFPQQIMSLTTDSEQVNALGSQ 137
            A   G  +R  VR+   T    L S       + L L+  + ++        + A  + 
Sbjct: 84  LATALGR-NRHSVRDVRRTVRQGLWSAGLISLPLWLILWHTEAVLIAFGQEPALAAEAAG 142

Query: 138 YLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILIFGKFGFPAMG 197
           ++    + +        +   L A+ +P      +G+ I  N +  W LIFG  G PA+G
Sbjct: 143 FMHTLQWGLLPFLGYIVLRAFLSALERPMWPLLVAGLAIGFNALAAWALIFGHLGLPALG 202

Query: 198 IQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISRFLRLSLPTTFNF 257
           + GA +++ LS    +A L   +  ++ L  +         DWP++    RL LP   +F
Sbjct: 203 LPGAGVSSSLSSLFMVAGLALVITRQRRLKRYRLFGRFWRPDWPRLVTLWRLGLPMAISF 262

Query: 258 LIWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGNQLGAKNYE 317
               +       +MG  G   LAA ++   + +++  + +G+  AA V VG  LGA    
Sbjct: 263 AFEVSIFQASMMMMGILGADALAAHTIALQIATLTFMVPLGLGQAATVRVGRALGAGTIP 322

Query: 318 AVYYQAIGVTACSVLVGIVVAIGLYLVQIP--VLGAF-TALTPETRELSEKFMLILCLGI 374
           A+  +  G  A    V  +    L ++ +P  ++GAF  A   E   + +  ++++ L  
Sbjct: 323 AL--RRAGWVAYGAGVAFMGGAALMMLSVPRLLIGAFLDADLAENAPVIDLAVVLMALAA 380

Query: 375 VLRSFPMTAIV--GVLRAGGDVKFCLGQDIVAQWCIGIPLAAFAALVLKVEPEWIYL 429
           + +       V  G+LR   D K  +    +  W +G+PL A  A  L V    +++
Sbjct: 381 LFQIADGAQAVCNGMLRGLHDTKVPMLLAALGYWGLGLPLGALLAFPLGVGAPGVWI 437