Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

 Score = 71.6 bits (174), Expect = 5e-17
 Identities = 82/355 (23%), Positives = 150/355 (42%), Gaps = 23/355 (6%)

Query: 8   LSHMRGDFFRRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTI 67
           + ++ GD  + ++ I+LP+ +     S   ++D + +  LG   +AA+G+     F    
Sbjct: 7   VQNLLGDPKKAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMA 66

Query: 68  MLVGVTTGGALLTAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTD 127
           +  GV  GG+   ++  G  + K   ++ A+  +V        ++  + F   I SL   
Sbjct: 67  ISNGVGIGGSSAISRRIGQNN-KDAADNIAVHSIVLGIIIGILLIGVIPFLGAIFSLIGA 125

Query: 128 SEQVNALGSQY-------LIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNV 180
           S     +  +Y        ++  FT  A A +       RAM+          +G V N+
Sbjct: 126 SGITVTMAVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYA-------IILGSVLNI 178

Query: 181 VLNWILIFGKFGFPAMGIQGAAIATVLSGAIEIACLYSYLYGKKH-LMAFGWQDIKAVID 239
           VL+ I I+       MG+ GAA AT+LS  I       +L+ KK   +   ++  K  +D
Sbjct: 179 VLDPIFIY----VLNMGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFK--LD 232

Query: 240 WPKISRFLRLSLPTTFNFLIWAAGLFTYHAIMGQTGVQ-GLAALSVMTPVESISLSLLIG 298
              I     + LP + + L  A  +F   AI+ + G   G+A  S    + S+    L+G
Sbjct: 233 INIIKEIFSIGLPASISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVG 292

Query: 299 MSTAAAVLVGNQLGAKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQIPVLGAFT 353
           ++T   V+ G   G+ N E +           +LV  ++A  + + +  +   FT
Sbjct: 293 LATGVTVVTGAAYGSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFT 347