Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis JJ

 Score = 70.9 bits (172), Expect = 8e-17
 Identities = 79/348 (22%), Positives = 145/348 (41%), Gaps = 9/348 (2%)

Query: 8   LSHMRGDFFRRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTI 67
           + ++ GD  + ++ I+LP+ +     S   ++D + +  LG   +AA+G+     F    
Sbjct: 7   VQNLLGDPKKAIVKISLPMVIAMSFQSLYNIIDAIWVAGLGSDALAAIGLFFPFMFALIA 66

Query: 68  MLVGVTTGGALLTAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTD 127
           +  GV  GG+   ++  G    K   ++ A+  +V        +   + F   I SL   
Sbjct: 67  ISNGVGIGGSSAISRRIGQ-KNKDAADNIAVHSIVLGIILGILLTGVIPFLGTIFSLIGA 125

Query: 128 SEQVNALGSQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILI 187
           S     +  +Y  I      A+   +     LR       + +   +G V N+VL+ I I
Sbjct: 126 SGNTVTMAVEYSTILFGGAVALLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFI 185

Query: 188 FGKFGFPAMGIQGAAIATVLSGAIEIACLYSYLYGKKH-LMAFGWQDIKAVIDWPKISRF 246
           +       MG+ GAA AT+LS  I       +L+ KK   +   ++  K  +D   I   
Sbjct: 186 Y----VLNMGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFK--LDINIIKEI 239

Query: 247 LRLSLPTTFNFLIWAAGLFTYHAIMGQT-GVQGLAALSVMTPVESISLSLLIGMSTAAAV 305
             + LP + + L  A  +F   AI+ +  G  G+A  S    + S+    L+G++T   V
Sbjct: 240 FSIGLPASISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTV 299

Query: 306 LVGNQLGAKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQIPVLGAFT 353
           + G   G+ N E +           +LV  ++A  + + +  +   FT
Sbjct: 300 VTGAAYGSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFT 347