Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., MATE efflux family protein from Marinobacter adhaerens HP15

 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 65/303 (21%), Positives = 125/303 (41%), Gaps = 8/303 (2%)

Query: 17  RRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTGG 76
           R+L ++  P+    +   +  L D   +GQLG   +AA+G       +   + VG+    
Sbjct: 12  RQLYSMTWPMLFGVLSLMTFQLADSAFVGQLGRDPLAALGFTLPMQQLIIGLQVGLGIAT 71

Query: 77  ALLTAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTDSEQVNALGS 136
             + ++  GAGD         L   V     F   +   F    IM+     + +  L  
Sbjct: 72  TAIVSRTLGAGDELRAFRLGGLIITVGGSLVFVICMALWFLQSHIMTALGAEDSLLPLVR 131

Query: 137 QYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILIFGKFGFPAM 196
           QY +      +  A +       R+     +  +      ++N+ L+ + IF  FG+   
Sbjct: 132 QYWVPWLMAAWTGAFLYFGYSVCRSHGDTKLPGYMMVATSLTNIALDPLYIF-VFGW--- 187

Query: 197 GIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISRFLRLSLPTTFN 256
           G+ GAA AT+ S  I    +Y  L  K+H + F   D++ +  W  + +   +  P   +
Sbjct: 188 GLPGAAWATITSFGIGCLVIYPKLL-KRHWIRF---DLRELALWKALKQLNGIMAPAMVS 243

Query: 257 FLIWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGNQLGAKNY 316
            L+ A       A++   G   +AA  + T +E  S+ +++ ++ +   ++G  LGA + 
Sbjct: 244 QLMPAVSAMLATALVAGFGSAAVAAWGLGTRLEFFSIVVVLALTMSMPPMIGRMLGAGDI 303

Query: 317 EAV 319
           E +
Sbjct: 304 EQI 306



 Score = 40.4 bits (93), Expect = 1e-07
 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 6/141 (4%)

Query: 241 PKISRFL-RLSLPTTFNFLIWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGM 299
           P ++R L  ++ P  F  L          A +GQ G   LAAL    P++ + + L +G+
Sbjct: 8   PSLARQLYSMTWPMLFGVLSLMTFQLADSAFVGQLGRDPLAALGFTLPMQQLIIGLQVGL 67

Query: 300 STAAAVLVGNQLGA-KNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQ---IPVLGAFTAL 355
             A   +V   LGA     A     + +T    LV  V+ + L+ +Q   +  LGA  +L
Sbjct: 68  GIATTAIVSRTLGAGDELRAFRLGGLIITVGGSLV-FVICMALWFLQSHIMTALGAEDSL 126

Query: 356 TPETRELSEKFMLILCLGIVL 376
            P  R+    +++    G  L
Sbjct: 127 LPLVRQYWVPWLMAAWTGAFL 147