Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  101 bits (251), Expect = 6e-26
 Identities = 97/439 (22%), Positives = 182/439 (41%), Gaps = 13/439 (2%)

Query: 19  LIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTGGAL 78
           +IA+  PI ++ ++ S  G+ D+ ML    +  +AAVG+  +  F   +M + V+TG ++
Sbjct: 14  IIALTWPIFIETLLQSLLGISDIFMLSHYSDNAVAAVGLTTQLMFFMMVMSMMVSTGASI 73

Query: 79  LTAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTDSEQVNALGSQY 138
           L +Q  GAG  +   +    +  +S   A        F    I+ L     +V   G  Y
Sbjct: 74  LISQNNGAGRTQEATDIGVASVALSLGLAVVMGAAMFFCAHGIIGLFELEPKVAGYGYDY 133

Query: 139 LIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILIFGKFGFPAMGI 198
           L+I       +    + A  LR+      +   +    + NV+ N+I ++  FG P  G+
Sbjct: 134 LLICGSLSIGLVMNIAFAAILRSYGFTRSAMLVTLSTGLMNVLGNYIALYSPFGLPVYGV 193

Query: 199 QGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISRF--LRLSLPTTFN 256
            G AI+TV S  +  A +   +   KH+       ++ +   P+ + +  +R+ L     
Sbjct: 194 TGVAISTVTSQLMG-ALIMLAVIRSKHIPL----PMQRLNSLPRSTYWSVMRIGLLNAGE 248

Query: 257 FLIWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGNQLGAKNY 316
            L +     T    + Q G   L A +    +        + +  AA +  G  +G + +
Sbjct: 249 MLSYNVAQMTIIYFISQMGTLSLTAYTYGLNISRFIYCFSVALGQAAQIQTGYYVGKQWF 308

Query: 317 EAVYYQAIGVTACSVLVGIVVAIGLYLVQIPVLGAFTALTPETRELSEKFMLILCLGIVL 376
           + +  +         LVG +V++ + L+             E  E+ +   L+L   I L
Sbjct: 309 DEITVR----VQKYCLVGFIVSLAIVLIFFWQRFTIVGWLSENPEVIQLTALLLLGSIAL 364

Query: 377 RSFPM--TAIVGVLRAGGDVKFCLGQDIVAQWCIGIPLAAFAALVLKVEPEWIYLLFLTE 434
            +  +    I+  L+  GDV F +   + + W IG+ LA F  L L       +L    +
Sbjct: 365 ETGRVFNLVIISALKGAGDVAFTVRVGLFSMWGIGVLLAWFFGLYLGYGVLAAWLAVAAD 424

Query: 435 EVVKWFGSLHRMKSKKWMK 453
           E V+    + R +S +W +
Sbjct: 425 EWVRGLIMVQRWRSGRWQR 443