Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., MATE efflux family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 97.4 bits (241), Expect = 9e-25
 Identities = 116/465 (24%), Positives = 194/465 (41%), Gaps = 51/465 (10%)

Query: 16  FRRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTG 75
           +R ++ I LP+       +     D L L       IAA   A  A+ +  +  +GVT  
Sbjct: 22  YREVLHIGLPLVAGMASTTVMQFTDRLFLSHYSVESIAAALPAGLASLLLLLTCMGVTGY 81

Query: 76  GALLTAQYWGAGDRK---GVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTDSEQVN 132
            ++  AQY GAG      GV   + +  LV       T LL     + I SL   + ++ 
Sbjct: 82  ASVFIAQYIGAGQPHRVGGVLWQSLIASLVFGGLLAMTSLL----AEPIFSLAGHAPELQ 137

Query: 133 ALGSQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIG------------IVSNV 180
            L   Y II    + +V  +   ++G          TFFSG G             V NV
Sbjct: 138 RLEETYFIILQ--LGSVLSLVGNSLG----------TFFSGRGRTRPVMLANIAAAVVNV 185

Query: 181 VLNWILIFGKFGFPAMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDW 240
            L+++LI G + FP MGI GAA+ATV+   +    L   ++ + H   FG +  +   D 
Sbjct: 186 PLDYVLINGVWFFPEMGIAGAAVATVMGWGVTAVLLAIAVFNRDHETRFGVRS-QWRFDA 244

Query: 241 PKISRFLRLSLPTTFNFLIWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMS 300
             + R +R  LP+  NF +    +  +  ++G  G   LAA ++   + S++    +G++
Sbjct: 245 VMMRRLMRYGLPSGVNFFMELFAVTWFVFVVGTLGEVALAATNIAFSINSVAFLPTVGLN 304

Query: 301 TAAAVLVGNQLGAKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQI--PVLGAFTA--LT 356
            A   +VG  +G  + +    +A G T   V +  + A+ L  V +  P++  F    LT
Sbjct: 305 IAVGTMVGQAMGRGDPDGA-ARATGST-LHVAMAWMTALALVFVLLPGPLVDLFRPDNLT 362

Query: 357 P----ETRELSEKFMLILCLGIVLRSFPMTAIVGVLRAGGDVKFCLGQDIVAQWCIGIPL 412
           P    + RE + + +  +    +  S  +    G L+  GD  F +    V   CI + +
Sbjct: 363 PAAYADIRETTARLLAYVAFYCLFDSLTI-IFCGALKGAGDTAFVMWNMTVG--CIFVLI 419

Query: 413 AAFAALVLKVEPEW----IYLLFLTEEVVKWFGSLHRMKSKKWMK 453
               A  L+    W    ++L+F     V    S  R +  +W K
Sbjct: 420 --IPAYALRALGWWSLDSLWLVFSVYVSVLAVASYVRFRLGRWRK 462