Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., putative transport protein, multidrug efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 87.8 bits (216), Expect = 7e-22
 Identities = 111/473 (23%), Positives = 181/473 (38%), Gaps = 63/473 (13%)

Query: 14  DFFRRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVT 73
           + ++ LI++ LPI +  I     G  D LM+G     E+ A         +  I   G +
Sbjct: 10  EHYKALISLGLPIVIGQIGVIVLGFADTLMIGHHSTIELGAASFVNNVFNLVIIFSTGFS 69

Query: 74  ------TGGALLTAQYWGAGDRKGVRESTALTWLVSNFFAF-FTVLLFLFFPQQIMSLTT 126
                  GG   T QY  AG  + +R S     LV+       TVL F      + +L  
Sbjct: 70  YGLTPIVGGLYGTHQYASAG--QALRNSLLANLLVAFLLTIGMTVLYF-----NVGNLGQ 122

Query: 127 DSEQVNALGSQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGI------------ 174
             E +  +   YL++ +  +F              M   G   F  GI            
Sbjct: 123 PEELIPLIKPYYLVLLASLVFV-------------MLFNGFKQFTDGITDTKTAMWILLG 169

Query: 175 GIVSNVVLNWILIFGKFGFPAMGIQGAAIATVLSGAIEIACLY-------SYLYGKKHLM 227
           G V N++ N+ILI+GK G P MG+ GA I+T+ S  + +            +L  K    
Sbjct: 170 GNVLNIIGNYILIYGKLGLPEMGLLGAGISTLFSRIMMVVVFIIVFMRSPRFLRFKLGFY 229

Query: 228 AFGWQDIKAVIDWPKISRFLRLSLPTTFNFLIWAAGLFTYHAIMGQTGVQGLAALSVMTP 287
             GW   KA+       R   L  P  F   +  A       ++G  G   LA+  VM  
Sbjct: 230 RLGWS--KAI-----FGRLNSLGWPIAFQMGMETASFSLSAVMIGWLGTIALASHQVMLA 282

Query: 288 VESISLSLLIGMSTAAAVLVGNQLGAKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQIP 347
           +   +  +  GM  A AV V N  G  +   V   A       + +G+V++  ++L +  
Sbjct: 283 ISQFTFMMYYGMGAAVAVRVSNFNGQGDILNVRRSAYAGFHLMMALGVVLSSIVFLCRNY 342

Query: 348 VLGAFTALTPETRELSEKFM--LILCLGIVLRSFPMTAIVGVLRAGGDVKFCLGQDIVAQ 405
           + G FT  T     ++   +  L+   G  L+          LR   DVK  +    +A 
Sbjct: 343 LGGWFTDSTEVAAMVTSLILPFLVYQFGDGLQ----ITFANALRGISDVKLMMLIAFIAY 398

Query: 406 WCIGIPLAAFAALVLKVEPEWIYLLF----LTEEVVKWFGSLHRMKSKKWMKN 454
           + I +P+  F   VL+     +++ F     +  ++ W+   H+ K    ++N
Sbjct: 399 FLISLPVGYFCGFVLEWGIIGVWMAFPFGLTSAGLMLWWRFHHKTKLPPSIQN 451