Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  106 bits (265), Expect = 1e-27
 Identities = 99/438 (22%), Positives = 179/438 (40%), Gaps = 11/438 (2%)

Query: 19  LIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTGGAL 78
           ++A+  PI ++ ++ S  G+ D+ ML    +  +AAVG+  +  F   +M + V+TG ++
Sbjct: 14  IVALTWPIFIETLLQSLLGISDIFMLSHYSDNAVAAVGLTTQLMFFMMVMSMMVSTGASI 73

Query: 79  LTAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTDSEQVNALGSQY 138
           L +Q  GAG  +   +    +  +S   A        F    I+SL     +V   G+ Y
Sbjct: 74  LISQNNGAGQTQQATDIGVASVALSLGLAVVMGASMFFGAHGIISLFALEPEVAGYGNDY 133

Query: 139 LIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILIFGKFGFPAMGI 198
           L+I       +    + A  LR+      +   +    + NV+ N+I ++  FG P  G+
Sbjct: 134 LLICGSLSIGLVMNIAFAAILRSYGFTRSAMLVTSSTGLMNVLGNYIALYSPFGLPVYGV 193

Query: 199 QGAAIATVLSGAIEIACLYSYLYGKK-HLMAFGWQDIKAVIDWPKISRFLRLSLPTTFNF 257
            G AI+TV S  I    + + +  K   L     + +     W      +R+ L      
Sbjct: 194 TGVAISTVTSQIIGALIMLAVIRHKGIPLPMLRLKLLPRSTYW----SVMRIGLLNAGEM 249

Query: 258 LIWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGNQLGAKNYE 317
           L +     T    + Q G   L A +    +        + +  AA +  G  +G + ++
Sbjct: 250 LSYNVAQMTIIYFISQMGTLSLTAYTYGLNISRFIYCFAVALGQAAQIQTGYYVGKQWFD 309

Query: 318 AVYYQAIGVTACSVLVGIVVAIGLYLVQIPVLGAFTALTPETRELSEKFMLILCLGIVLR 377
            +     G      LVG + ++ + LV             E  E+ +   L+L   I L 
Sbjct: 310 EI----TGRVQKYCLVGFITSLAIVLVFYWQRFTIVGWLSENPEVIQLTALLLLGSIALE 365

Query: 378 SFPM--TAIVGVLRAGGDVKFCLGQDIVAQWCIGIPLAAFAALVLKVEPEWIYLLFLTEE 435
           +  +    I+  L+  GDV F +   + + W IG+ LA F  L L       +L    +E
Sbjct: 366 TGRVFNLVIISALKGAGDVAFPVRVGLFSMWGIGVLLAWFFGLHLGYGVLAAWLAVAADE 425

Query: 436 VVKWFGSLHRMKSKKWMK 453
            V+    +HR +S +W +
Sbjct: 426 WVRGLIMVHRWRSGRWQR 443