Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score = 78.2 bits (191), Expect = 5e-19
 Identities = 89/409 (21%), Positives = 160/409 (39%), Gaps = 29/409 (7%)

Query: 17  RRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTGG 76
           +RLI +ALP+ +  +  +  G +D +M G++   ++AAV V         + + G+    
Sbjct: 9   KRLIQLALPVLIAQVTQTMMGFIDTVMAGRVSAVDMAAVAVGTSLWLPAILFVQGLLMAF 68

Query: 77  ALLTAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTDSEQVNALGS 136
             L A + GA ++K + +  A             V+ FL     ++S      Q+  L  
Sbjct: 69  TPLFAHHNGANNQKAI-QPLAFQGAYLALIGGLGVMAFLASAPLVLSHMNLEPQLYNLTI 127

Query: 137 QYLI-----ITSFTMFAV--ACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILIFG 189
            Y+        +F ++ V   C   ++  L  M           +G+  N+  N+I I+G
Sbjct: 128 GYIDGILWGAPAFVLYQVLRGCSEGISYTLPTM-------IIGFVGLAVNIPANYIFIYG 180

Query: 190 KFGFPAMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISRFLRL 249
            FG PAMG  G  +AT L     +  +  Y+   K   A          D+  + +  +L
Sbjct: 181 HFGMPAMGGAGCGVATALVFWAMLIAMTIYMQLHKKFAALAPFSQFHRPDFATMKKMTKL 240

Query: 250 SLPTTFNFLIWAAGLFTYHA-IMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVG 308
            +P     L +   LF   A ++   G   +A+  +     +I   L + +  A ++ +G
Sbjct: 241 GMPIAM-ALFFEVSLFAIIALLLAPLGATVVASHQIALNFSAIVFMLPLSIGIAVSIRIG 299

Query: 309 NQLGAKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQIPVLGAFTAL-----TPETRELS 363
             LG    +      I      V + + +++ L    + VL  F         PE   L+
Sbjct: 300 YYLGRDRAD------ISAVVAKVGLWLALSLALSTAILTVLFRFQIAELYNSDPEVVVLA 353

Query: 364 EKFMLILCLGIVLRSFPMTAIVGVLRAGGDVKFCLGQDIVAQWCIGIPL 412
              ML+  L  +  S  + A  G LR   D +      + + W IG+ L
Sbjct: 354 GSLMLMAALYQLSDSIQVVA-AGALRGYKDTRSAFYITLFSYWGIGMTL 401