Pairwise Alignments

Query, 223 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Pseudomonas stutzeri RCH2

 Score =  148 bits (373), Expect = 1e-40
 Identities = 84/201 (41%), Positives = 118/201 (58%), Gaps = 3/201 (1%)

Query: 20  VLQGAELTLNQGDQLALMGESGSGKSTLLNLIAGLDSADSGEIWFPGFPMHHTSEHHRTA 79
           VL G +L+L +G+  AL+G SGSGKSTLLNLI  LD+  SGE++  G     + +  RT 
Sbjct: 33  VLHGIDLSLYRGELAALIGPSGSGKSTLLNLIGLLDAPSSGELYLLGQATRDSDDETRTH 92

Query: 80  FRRDNIGQIFQQYNLLPTLNIADNIRF---CRQLKGLPEDAGLWRQILSALDLMPLLGRY 136
            R   IG +FQ ++L+   ++ +N+      R  K  P D  L R +L  + L     + 
Sbjct: 93  LRNQAIGFVFQFHHLISAFSVLENVLMPLMIRHGKPSPADIELARGLLDEVGLGAFADKK 152

Query: 137 PEEVSGGQQQRAAIARALYMEPKILLADEPTGSLDERNAEAVMRLLTTLTRQLNCALLLV 196
           P ++SGGQQQR AIARAL   P +LLADEPTG+LD R A++V  L   +  Q  CA+L+V
Sbjct: 153 PTQISGGQQQRVAIARALVTRPPLLLADEPTGNLDTRTAQSVFELFHRINAQFGCAVLVV 212

Query: 197 THSEKVAQHMDGCIRLQGGQL 217
           TH  ++A      I+L  G +
Sbjct: 213 THDPRLAADCARTIQLVDGHI 233