Pairwise Alignments

Query, 223 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  182 bits (463), Expect = 4e-51
 Identities = 105/213 (49%), Positives = 129/213 (60%), Gaps = 3/213 (1%)

Query: 6   DLCKGYVDGDEFHPVLQGAELTLNQGDQLALMGESGSGKSTLLNLIAGLDSADSGEIWFP 65
           ++ K + DG E H VL    L ++ G+ +AL G SGSGKSTLLNLIAG D  D G I   
Sbjct: 9   EISKSFQDGGERHRVLDNLTLDIHPGETVALTGPSGSGKSTLLNLIAGFDQPDDGHIRLL 68

Query: 66  GFPMHHTSEHHRTAFRRDNIGQIFQQYNLLPTLNIADNIRFCRQLKGLPEDAGLW-RQIL 124
           G P  H S      FRR  +G +FQQ+NLL  LN+  NI F   L G P D   W   + 
Sbjct: 69  GRPSKHFSASDWDRFRRSELGMVFQQFNLLEPLNVQANIHFPLALNGKPWDD--WCHTLT 126

Query: 125 SALDLMPLLGRYPEEVSGGQQQRAAIARALYMEPKILLADEPTGSLDERNAEAVMRLLTT 184
           S L L  LL R  + +SGGQQQR AIARAL   P +LLADEPTG+LDE + + VM LLT+
Sbjct: 127 SRLGLTELLSRPVDSLSGGQQQRVAIARALSQRPPLLLADEPTGNLDEHSGDEVMALLTS 186

Query: 185 LTRQLNCALLLVTHSEKVAQHMDGCIRLQGGQL 217
           L R+ N A+L+VTHSE+ A  M     L  GQ+
Sbjct: 187 LARESNTAILMVTHSERCAAFMQRRWHLCNGQI 219