Pairwise Alignments

Query, 223 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  163 bits (412), Expect = 3e-45
 Identities = 95/216 (43%), Positives = 131/216 (60%), Gaps = 3/216 (1%)

Query: 4   LIDLCKGYVDGDEFHPVLQGAELTLNQGDQLALMGESGSGKSTLLNLIAGLDSADSGEIW 63
           L ++ KG+ DGD+FH VL   +L L  G+ +AL G SGSGKSTLLN+IAG +   SG + 
Sbjct: 7   LSEISKGFNDGDKFHLVLDRLDLELALGETVALTGPSGSGKSTLLNIIAGFERPSSGALT 66

Query: 64  FPGFPMHHTSEHHRTAFRRDNIGQIFQQYNLLPTLNIADNIRFCRQLKGLPEDAGLW-RQ 122
                     +   + FR   +G +FQQ+NLL  LN+ DNI F   L+G  +    W   
Sbjct: 67  LLTQDTRTWDDSRWSQFRHHQLGVVFQQFNLLTPLNVEDNIAFPLHLQG--DGWNAWCDH 124

Query: 123 ILSALDLMPLLGRYPEEVSGGQQQRAAIARALYMEPKILLADEPTGSLDERNAEAVMRLL 182
           ++ AL L PLL R+ E +SGGQQQR AIARAL  +P +LLADEPTG+LD+  +  VM L+
Sbjct: 125 LVDALGLRPLLKRHVEALSGGQQQRVAIARALAHKPALLLADEPTGNLDQTTSLEVMALI 184

Query: 183 TTLTRQLNCALLLVTHSEKVAQHMDGCIRLQGGQLH 218
             L  + + ++L+VTHS + A  M     L  G++H
Sbjct: 185 CDLAAEHDTSILMVTHSMECAAFMQRRWHLDLGRVH 220