Pairwise Alignments

Query, 223 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  145 bits (367), Expect = 5e-40
 Identities = 78/199 (39%), Positives = 119/199 (59%), Gaps = 2/199 (1%)

Query: 21  LQGAELTLNQGDQLALMGESGSGKSTLLNLIAGLDSADSGEIWFPGFPMHHTSEHHRTAF 80
           ++  +LT+ QG+ +A+MG SGSGK+TLLN+I G+DS  SG ++  G  + H SE    AF
Sbjct: 23  VKSLDLTIAQGEFVAIMGPSGSGKTTLLNMIGGIDSPSSGAVFIDGEDITHLSEQALIAF 82

Query: 81  RRDNIGQIFQQYNLLPTLNIADNIRFCRQLKGLPEDAGLWR--QILSALDLMPLLGRYPE 138
           RRD++G IFQ Y+LLP L   +N+ F  QL+G  E     R   +L+ + L     + P 
Sbjct: 83  RRDHVGFIFQDYSLLPVLTALENVEFVMQLQGHSEAECRDRAMALLAQVGLAAQQDKIPA 142

Query: 139 EVSGGQQQRAAIARALYMEPKILLADEPTGSLDERNAEAVMRLLTTLTRQLNCALLLVTH 198
           ++SGGQQQR A+ARAL   P+ ++ADEPT +LD ++   ++ ++ +L  Q     +  TH
Sbjct: 143 KLSGGQQQRVAVARALAPRPRFVMADEPTANLDAKSTAELLDIMQSLNEQEGTTFIFSTH 202

Query: 199 SEKVAQHMDGCIRLQGGQL 217
             +V       I  + G+L
Sbjct: 203 DPRVIARAKRVIVFEDGRL 221