Pairwise Alignments

Query, 223 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., lipoprotein releasing system, ATP-binding protein (RefSeq) from Shewanella loihica PV-4

 Score =  153 bits (387), Expect = 2e-42
 Identities = 85/219 (38%), Positives = 133/219 (60%), Gaps = 2/219 (0%)

Query: 1   MLQLIDLCKGYVDGDEFHPVLQGAELTLNQGDQLALMGESGSGKSTLLNLIAGLDSADSG 60
           +LQ+ ++ K Y +G     VL G  L++ +G+Q+A++G SGSGKSTLL+++  LD   SG
Sbjct: 9   LLQVSNVSKRYHEGSIDTQVLSGVNLSIAKGEQVAIIGSSGSGKSTLLHIMGTLDKPSSG 68

Query: 61  EIWFPGFPMHHTSEHHRTAFRRDNIGQIFQQYNLLPTLNIADNIRFCRQLKGLP--EDAG 118
           ++ F G  ++  S   + A R   +G I+Q ++LLP     +N+     ++  P  E   
Sbjct: 69  QVMFDGEDLYQLSPSRQAAIRNQELGFIYQFHHLLPEFTALENVAMPGLIQKRPRQEVEQ 128

Query: 119 LWRQILSALDLMPLLGRYPEEVSGGQQQRAAIARALYMEPKILLADEPTGSLDERNAEAV 178
             +++LS + L   L   P E+SGG++QR AIARAL   PK++LADEPTG+LD  + ++V
Sbjct: 129 EAKELLSRVGLGHRLHHTPAEMSGGERQRTAIARALINRPKLVLADEPTGNLDAASGDSV 188

Query: 179 MRLLTTLTRQLNCALLLVTHSEKVAQHMDGCIRLQGGQL 217
             L+  L  QL  A ++VTH  K+A  MD  +++Q GQL
Sbjct: 189 YELIRELGSQLGTAFVVVTHDPKLAARMDRQLKMQDGQL 227