Pairwise Alignments

Query, 223 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., lipoprotein releasing system ATP-binding protein LolD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  149 bits (377), Expect = 3e-41
 Identities = 83/221 (37%), Positives = 129/221 (58%), Gaps = 2/221 (0%)

Query: 1   MLQLIDLCKGYVDGDEFHPVLQGAELTLNQGDQLALMGESGSGKSTLLNLIAGLDSADSG 60
           +LQ+  + K Y DGD    VL   +L + +G+QLA++G SGSGKSTLL+++  LD   SG
Sbjct: 5   LLQVQAVSKSYHDGDVTTQVLSDVDLQVFKGEQLAIVGTSGSGKSTLLHIMGTLDKPSSG 64

Query: 61  EIWFPGFPMHHTSEHHRTAFRRDNIGQIFQQYNLLPTLNIADNIRFCRQLKGLPEDAGLW 120
           ++   G  ++  S   +   R  ++G I+Q ++LLP     +N+     ++G        
Sbjct: 65  KVLLAGEDLYQVSSARQAQIRNQDLGFIYQFHHLLPEFTALENVAMPAFIQGRDRTLAQA 124

Query: 121 --RQILSALDLMPLLGRYPEEVSGGQQQRAAIARALYMEPKILLADEPTGSLDERNAEAV 178
             + +L  + L   +   P E+SGG++QR AIARAL  +PK++LADEPTG+LD ++ EAV
Sbjct: 125 DAKVLLERVGLGHRMSHIPAELSGGERQRVAIARALINKPKLVLADEPTGNLDAKSGEAV 184

Query: 179 MRLLTTLTRQLNCALLLVTHSEKVAQHMDGCIRLQGGQLHV 219
             L+  L  QL  A ++VTH  K+A  MD  + ++ G L V
Sbjct: 185 YELIRELANQLGTAFVVVTHDPKLAARMDRQLTMKNGYLQV 225